DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and Rubcnl

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_941044.3 Gene:Rubcnl / 271221 MGIID:2685590 Length:675 Species:Mus musculus


Alignment Length:254 Identity:81/254 - (31%)
Similarity:130/254 - (51%) Gaps:22/254 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 HPISEICPEIGLASQGYKCAECGTMLNIKNTWIEP------RLCDYSGLYYCPRCNWNDSNFIPA 282
            ||  .|..:|.:.:|.:.||.|||.       |:|      |.|:|.|.|:|..|:.:..:.|||
Mouse   431 HP--PIKRDIAVVAQNFFCAGCGTP-------IQPKFVKRLRYCEYLGKYFCASCHSSAESCIPA 486

  Fly   283 RIIHNWDFSPRRVSRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAA 347
            ||:..|||...:||..:...:....::|:.:|...:..|:...::|..||.|::.|.|::..|..
Mouse   487 RILTMWDFRKYQVSDFSKWLLDSVWHQPVFKLLGGHHSLYAKAKELDRVKDLQEQLFHIKKLLKT 551

  Fly   348 CKIA-SELKLVDQQLGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQ 411
            |:.| |.||..:|   |..||......:|:.|..:.:.|.|:..|:.:.:|...|:.||.:|..:
Mouse   552 CRFADSVLKEFEQ---VPSHLTDECHIFSMDDFLRTKKGLLAPLLKDILRASLAHVDSCELCQGK 613

  Fly   412 AYICEICSNNEVIFPFD-DGCIKCDQCNSIFHRVCLTRKNMICPKCIRIQERRLQLDRM 469
            .:|||.|.:..|||||. ..|.:|..|.:.||:.|.  ::..||:|.||..||..|:.:
Mouse   614 GFICEFCQSTTVIFPFQTTTCRRCAACRACFHKQCF--QSSRCPRCARIIARRQHLESL 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369
zf-RING_9 259..461 CDD:464030 66/203 (33%)
RubcnlNP_941044.3 zf-RING_9 463..660 CDD:464030 64/201 (32%)
Blue background indicates that the domain is not in the aligned region.

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