DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and Rubcn

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_006521715.1 Gene:Rubcn / 100502698 MGIID:1915160 Length:981 Species:Mus musculus


Alignment Length:396 Identity:110/396 - (27%)
Similarity:168/396 - (42%) Gaps:86/396 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 HSLSSDMVVMNAIRAVVG---------HHFVPHH----------------PHHGK-----RNRLQ 170
            ||.|::.|.|..::...|         ...||.|                |..|:     :.|::
Mouse   631 HSTSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGQHADIYKLRIR 695

  Fly   171 AAAKRNYCDHCTTIIWSVVQNSYVCSDCGFLVHQKCIDGVKRVCAHVLVSERQHPISEICP--EI 233
            ......:......||::|                                   ||    .|  :|
Mouse   696 VRGNLEWAPPRPQIIFNV-----------------------------------HP----APTRKI 721

  Fly   234 GLASQGYKCAECGTMLN---IKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDFSPRRV 295
            .:|.|.|:||.||...:   ||..    |.|:|.|.|:|..|:.|....:|:||:..||||...|
Mouse   722 AVAKQNYRCAGCGIRTDPDYIKRL----RYCEYLGKYFCQCCHENAQMVVPSRILRKWDFSKYYV 782

  Fly   296 SRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACKIASELKLVDQQ 360
            |..:...:....|.||..:::.|..|:..|:.|..|:.||..|.||::....|::|.|  |:|..
Mouse   783 SNFSKDLLLKIWNDPLFNVQDINSALYRKVKLLNQVRLLRVQLYHMKNMFKTCRLAKE--LLDSF 845

  Fly   361 LGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEICSNNE-VI 424
            ..|..||.:....||||||:..:.|.|...|..:.:|...|:..|.:|.|:.:|||.|.|.| ||
Mouse   846 DVVPGHLTEDLHLYSLSDLTATKKGELGPRLAELTRAGAAHVERCMLCQAKGFICEFCQNEEDVI 910

  Fly   425 FPFD-DGCIKCDQCNSIFHRVCLTRKNMICPKCIRIQERR--LQLDRMKSTEDDDDDDDGVATDD 486
            |||: ..|..|::|.:.:|:.|.  |:..||:|.|:|.||  |....::|...|.:::...|...
Mouse   911 FPFELHKCRTCEECKACYHKTCF--KSGRCPRCERLQARRELLAKQSLESYLSDYEEEPTEALAL 973

  Fly   487 DVTAAE 492
            :.|..|
Mouse   974 EATVLE 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369 3/45 (7%)
zf-RING_9 259..461 CDD:464030 73/203 (36%)
RubcnXP_006521715.1 RUN_RUBCN 35..191 CDD:439048
Herpes_BLLF1 <198..>408 CDD:282904
zf-RING_9 746..946 CDD:464030 73/203 (36%)
Blue background indicates that the domain is not in the aligned region.

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