DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and plekhm1

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_002933223.2 Gene:plekhm1 / 100491541 XenbaseID:XB-GENE-6033729 Length:1061 Species:Xenopus tropicalis


Alignment Length:256 Identity:76/256 - (29%)
Similarity:133/256 - (51%) Gaps:13/256 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 AHVLVSERQHPISE----ICPEIGLASQGYKCAECGTMLNIKNTWIEPRLCDYSGLYYCPRCNWN 275
            :|:    |.|.:.:    |..|.||.||.:|||.|...:..:  :.:.:.|.||.||||..|:.:
 Frog   810 SHI----RGHALFQYLLYIPSEKGLDSQNFKCAACHKQIGFQ--FGKAKHCAYSALYYCEWCHQD 868

  Fly   276 DSNFIPARIIHNWDFSPRRVSRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVH 340
            :.:.||:|::||||.:.:.|||.||:.:.:.||:|:|.:...|..|:.....:..:...|:.|..
 Frog   869 EGSVIPSRMVHNWDLTEQAVSRPALKFLNMVLNEPIINVPSVNSGLYQHSHTMHNISHSREKLRL 933

  Fly   341 MRHYLAACKIASELKLVDQQLGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSC 405
            :..||..|: :...:.:.:.|..|.:|......||:.|..|:.:|....||.........|:..|
 Frog   934 LAEYLQTCR-SGAFQELSKSLDNRTYLLDCAHTYSVQDFRQIANGEFELFLGAAVDLATKHVYDC 997

  Fly   406 PMCLAQAYICEICSNNEVIFPFD-DGCIKCDQCNSIFHRVCLTRKNMICPKCIRIQERRLQ 465
            .:|..:.:||:||:.:|:|:||. :...:|..|.|:||..|...... ||:|:|.::.::|
 Frog   998 DLCSQKGFICQICNQDEIIYPFQFETTTRCGDCKSVFHIPCKAEVKQ-CPRCLRRKKYQVQ 1057

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369 1/3 (33%)
zf-RING_9 259..461 CDD:464030 62/202 (31%)
plekhm1XP_002933223.2 RUN_PLEKHM1 17..191 CDD:439041
PH_PLEKHM1 523..644 CDD:241475
PH 699..789 CDD:214574
zf-RING_9 852..1053 CDD:464030 62/202 (31%)
Blue background indicates that the domain is not in the aligned region.

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