DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DEF8 and plekhm3

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_002937160.2 Gene:plekhm3 / 100487952 XenbaseID:XB-GENE-5825075 Length:752 Species:Xenopus tropicalis


Alignment Length:258 Identity:93/258 - (36%)
Similarity:151/258 - (58%) Gaps:9/258 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 ISEICPEIGLASQGYKCAECGTMLNIKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDF 290
            ::.:..|.||.:|.:|||.|...:.:.|.  :.::|.|||.|||..|:.:|...||||:|||||.
 Frog   489 LTSLALERGLTAQSFKCAGCQRPIGLSNE--KAKVCSYSGWYYCSTCHVDDGFIIPARLIHNWDA 551

  Fly   291 SPRRVSRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACK--IASE 353
            |..:||:.|.:.:.....:|||.:.::||.|:..|:.|..|.:|||.|..:|.||.:|:  :|.:
 Frog   552 SKHKVSKQAKEFLEYVYEEPLIDVHQENPLLYRHVDSLAHVVRLRQQLKSLRAYLFSCRAVVAED 616

  Fly   354 LKLVDQQLGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEIC 418
            |:   :::..|.:|.|....||||||.||..|.|:.||..:.|....|:.||.:|..:.:|||||
 Frog   617 LR---RRIFPREYLFQQIHLYSLSDLQQVIEGKLAPFLLKIIKFATSHVYSCSLCSQKGFICEIC 678

  Fly   419 SNNEVIFPFDDGCI-KCDQCNSIFHRVCLTRKNMICPKCIRIQERRLQLDRMKSTEDDDDDDD 480
            :|.|:::||::... :|:.|.::||..|..| .:.||||:|.:.::.|....:..:.|...|:
 Frog   679 NNGEILYPFEENSTSRCENCGAVFHTDCKVR-TVPCPKCVRKELQKKQKSFWQQLDMDGSLDE 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369
zf-RING_9 259..461 CDD:464030 81/204 (40%)
plekhm3XP_002937160.2 PH-like 207..296 CDD:473070
PH-like 355..442 CDD:473070
zf-RING_9 520..720 CDD:464030 81/203 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.