Protein Alignment Ir68b and grin3ba

DIOPT Version :9

• Sequence 1: NP_648548.1
• Gene: Ir68b / 39378
• FlyBaseID: FBgn0036250
• Length: 635
• Species: Drosophila melanogaster
• Sequence 2: XP_021323058.1
• Gene: grin3ba / 566411
• ZFINID: ZDB-GENE-070912-354
• Length: 1118
• Species: Danio rerio
• Alignment Length: 606
• Identity: 115/606 - (18%)
• Similarity: 192/606 - (31%)
• Gaps: 203/606 - (33%)

  Fly   124 VWPNAGRHQL-----LRLFRGSWAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYAR 183
            :||...:||.     :|| .|.|...|                 |.|...|:|:..::....:.|
Zfish   426 LWPGVTQHQREDGPGIRL-GGRWQAGL-----------------PVAGSRLRVVTLVEHPFVFTR 472

  Fly   184 KVKDLRGYPLRFSMFTDPLMAMPRSPVETAGYQAVDGVAARVVGEMLNASVTYVFPEDNES--YG 246
            :| |..|......:..||         :|...:.::.:...:  |..|:|   ..|.|...  ||
Zfish   473 EV-DEEGQCPAGQLCLDP---------QTNNSEVLNQLFREL--EQTNSS---SLPTDMRKCCYG 522

  Fly   247 RCL---------------------------PNGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVE 284
            .|:                           ..|.::|:|.|::.|....|..|..:.......::
Zfish   523 YCIDLLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWSGLVGDLLSGVADMAVTSFSINSARSRVID 587

  Fly   285 VLYPYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVI 349
            ...|:...:|.::|.:.........|:.....::|..:.|.|.:..|..
Zfish   588 FTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFI---------------- 636

  Fly   350 QFQATWYEILEMFGKTHVGEPAGRLSSFSSM----------RT------------FLMG-WILFS 391
                |.||....||.|..|....|:.|:||.          ||            |||. |.:|.
Zfish   637 ----TLYEWNSPFGMTPHGRNRIRVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIFC 697

  Fly   392 YVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYDAVRSALTE----------HQ 446
            .::.:.|.|.|.:..|.....|:|..:.|   :.:|..::...:..||.:..|          |:
Zfish   698 LLVLSSYTANLAAVMVGEKTFEEVSGIHD---VKLHHPSLGFRFGTVRESSAEDYVKKSFPEMHE 759

  Fly   447 YGLLENRSRQLPLGIATSYYQPVVRRRDRRAAFIMRDFHARDFLAITYDSQAE-----RP----A 502
            |....|:. ..|.|::|....|     .:..|||| |....|: .::.|:..:     :|    .
Zfish   760 YMRRFNKP-TTPDGVSTLKTDP-----PQLDAFIM-DKALLDY-EVSIDADCKLLTVGKPFAIEG 816

  Fly   503 YHIAREYLRSMICTYILPRGSPFLHRLESLYSGFLEHGFFEHWRQMDLITRVGASPDAEEFLEDL 567
            |.|.            ||:.||....:....|.:...|:      ||:                |
Zfish   817 YGIG------------LPQNSPLTRNVSEYVSRYKSDGY------MDM----------------L 847

  Fly   568 GDQTDTDSGSNELAIRNKKVVLTLDILQ-------GAFYLWSVGIGISCLGFAVEHA-------- 617
            .|:.      .::....|:|....:.||       |.|.|..||:..:.|....|||
Zfish   848 HDKW------YKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCVGVAGALLTLLGEHAFFRFILPH 906

  Fly   618 --------HWFWRRQTLRNAV 630
                    :|....|.:..|:
Zfish   907 LRHQQRFKYWLHTSQKIHRAI 927

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir68b	NP_648548.1	Lig_chan	333..607	CDD:278489	65/322 (20%)
grin3ba	XP_021323058.1	Periplasmic_Binding_Protein_Type_1	26..428	CDD:324556	0/1 (0%)
		PBP2_iGluR_NMDA_Nr3	457..852	CDD:270438	88/480 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170591836
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.930