DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and grik1b

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:588 Identity:106/588 - (18%)
Similarity:196/588 - (33%) Gaps:154/588 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FDADYSALELDLYRCVGSRLPVIT-RNMEAHELEPFR-RTDSLSIF----------QIPAAEKGD 99
            :||.|      :......|...|| .:::.|..:|:| .:..:|:|          || ...|.|
Zfish   352 YDAVY------MVAAASQRASQITVSSLQCHRHKPWRFGSRFISMFKEAQWNGLTGQI-IINKTD 409

  Fly   100 SLVRRILDMLNPHQRRKHMHKYLFVWPNAGRHQLLRLFRGSWAKKLLYGLAITGRENGTFDFDPF 164
            .| |:..|:.....:...:.|.|    .:||...:....|.|.......|..:.::..|...|..
Zfish   410 GL-RKDFDLDIISLKEDGLEKPL----ESGRFNKVWKKIGVWNSNTGLNLTDSNKDKNTNVTDSM 469

  Fly   165 AWGGLQVIQRLDGE-VPYARKVKDLRGYPLRFSMFTDPLMAMPRSPVETAGYQAVDGVAARVVGE 228
            |...|.|...|:.. |.|.:..|.|.|.. ||..:...|:                    :.:..
Zfish   470 ANRTLIVTTILENPYVMYKKSDKPLYGND-RFEGYCLDLL--------------------KELSN 513

  Fly   229 MLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVEVL---YPYT 290
            :|..|.......|.: ||.....|.:.|:|.:::   .|.|..:...|...:...:|:   .|:.
Zfish   514 ILGFSYEVKLVTDGK-YGAQNDKGEWNGMVRELI---DHVADLAVAPLTITYVREKVIDFSKPFM 574

  Fly   291 RRNLHLVV-PASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQAT 354
            ...:.::. ..:...|....|:......:|..:|:..|.|..|.:|:.|..           ...
Zfish   575 TLGISILYHKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT-----------PYE 628

  Fly   355 WY---------EILE---------MFGKTHVGEPAGRLSSFSSMRTFLMG--WILFSYVLSTIYF 399
            ||         :::|         .||...:.:....|.. .::.|.::|  |..|:.::.:.|.
Zfish   629 WYNPHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMP-KALSTRIVGGIWWFFTLIIISSYT 692

  Fly   400 AKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYDAVRSALTEHQYGLLENRSRQLPLGIATS 464
            |.|.:.......:..:|..|||                  :..|:.:||.:              
Zfish   693 ANLAAFLTVERMDSPIDSADDL------------------AKQTKIEYGAV-------------- 725

  Fly   465 YYQPVVRRRDRRAAFIMRDFHARDFLAITYDSQAERPAYHIAREYLRSMICTYILPRGSPFLHR- 528
                                  ||...:|:..:::...|.....::.|...|.::......:.| 
Zfish   726 ----------------------RDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNNREGIQRV 768

  Fly   529 LESLYSGFLEHGFFEHWRQMDL-ITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLD 592
            |.:.|:..:|....|:..|.:. :|::|...|::      |....|..||   ..|:|   :|:.
Zfish   769 LTTDYALLMESTSIEYISQRNCNLTQIGGLIDSK------GYGVGTPIGS---PYRDK---VTIA 821

  Fly   593 ILQ 595
            |||
Zfish   822 ILQ 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 47/285 (16%)
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 24/114 (21%)
ANF_receptor 80..423 CDD:279440 18/78 (23%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 78/457 (17%)
Lig_chan 602..871 CDD:278489 52/301 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591615
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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