DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68b and CG11155

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:662 Identity:118/662 - (17%)
Similarity:216/662 - (32%) Gaps:208/662 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TRNMEAHELEPFR-RTDSLSIFQIPAAEKGDSLVRRILDMLNPHQRRKH---------------- 117
            |.::|.::||.|| .:.:::.|::...:.     :|.|:::|..|:.:|                
  Fly   256 TFDLETYDLEDFRYNSVNITAFRLVDVDS-----KRYLEVINQMQKLQHNGLDTINGSPYIQTES 315

  Fly   118 --MHKYLFVWPNAGRHQL-LRLFRGSWAKKL-------------LY---GLAITGRENGTFDF-- 161
              |...::.:.| |.|.| |...:..:.|.|             ||   ..|||....||..|  
  Fly   316 ALMFDSVYAFAN-GLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVE 379

  Fly   162 ---------------------------------DPFAW-----GGLQVIQRLDGEVPY--ARKVK 186
                                             ||.|:     ..:.::.....|.||  .::.|
  Fly   380 GRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREERPYVMVKEDK 444

  Fly   187 DLRGYPLRFSMFTDPLMAMPRSPVETAGYQ-AVDGVAARVVGEMLNASVTYVFPEDNESYGRCLP 250
            :|.| .|||..|...|:   ::.....|:| .::.|...:.|       .|: ||.|        
  Fly   445 NLTG-NLRFEGFCIDLL---KAIATQVGFQYKIELVPDNMYG-------VYI-PETN-------- 489

  Fly   251 NGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLI-FVRVF 314
              ::.|:|.:::......|..|..:.......::...|:....:.::......||..|. |:...
  Fly   490 --SWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPL 552

  Fly   315 RRTVWYLLLVTLLVVVLVFWVMQRL---QRRIP-----RRGVIQFQATWYEILEMFGKTHVGEPA 371
            ...:|..:|...::|....:||.|.   :.:.|     ...:::.|.:..........|.:.:.:
  Fly   553 AIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGS 617

  Fly   372 GRLSSFSSMRTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYD 436
            |.....:|.|.....|..|..::.:.|.|.|.:..........::...||               
  Fly   618 GLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDL--------------- 667

  Fly   437 AVRSALTEHQYGLLENRS-----RQLPLGIATSYYQPVVRRRDRR--AAFIMRDFHARDFLAITY 494
               :..||..||.||..|     |...:||    ||.:.|..:.|  |.|:.           ||
  Fly   668 ---AEQTEISYGTLEGGSTMTFFRDSKIGI----YQKMWRYMENRKTAVFVK-----------TY 714

  Fly   495 DSQAERPAYHIAREYLRSMICTYIL----------------------PRGSPF-----LHRLESL 532
            :...:|.........:.|.:..|.:                      |:|||:     |..||..
  Fly   715 EDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 779

  Fly   533 YSGFLEHGFFEHWRQM-DLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQG 596
            ..|.::..:.:.|:.. |:..|               |....:|.:|.|.:.|         :.|
  Fly   780 EKGIIQILYDKWWKNTGDVCNR---------------DDKSKESKANALGVEN---------IGG 820

  Fly   597 AFYLWSVGIGIS 608
            .|.:...|:.::
  Fly   821 VFVVLLCGLALA 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 56/316 (18%)
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 28/159 (18%)
ANF_receptor 61..393 CDD:279440 28/142 (20%)
PBP2_iGluR_Kainate 424..793 CDD:270432 76/423 (18%)
Lig_chan 555..829 CDD:278489 58/330 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463129
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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