DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68b and Ir56d

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_611432.1 Gene:Ir56d / 37252 FlyBaseID:FBgn0034458 Length:632 Species:Drosophila melanogaster


Alignment Length:637 Identity:125/637 - (19%)
Similarity:225/637 - (35%) Gaps:177/637 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VITRNMEAHELEPFRRTDSL-SIFQIPAAEKGDSLVRRILDMLNPHQRRKHMHKYLFV-WPNAGR 130
            :|||  |.|...|..:..|. |:..:....|.|.    |:::.:.:|:..|..|.:|| :|:...
  Fly    81 IITR--EHHLGIPMMQFISTPSLVMVFTTGKDDP----IMELASHNQQGIHWLKTIFVLFPSLQS 139

  Fly   131 H--------------QLLRLFRGSWAKKLLYGLAITGRENGTFDFDPF----------AWGGLQV 171
            .              ::..::...|.|:.:....||.::| .|..||:          .|     
  Fly   140 RDFETNPESLAQFTAEIKDVYDWVWRKQFINTFLITIKDN-VFILDPYPTPSIVNKTGVW----- 198

  Fly   172 IQRLDGEVPYARKVKDLRGYPLRFSMFTDPLMAMPR---SPVETAGYQA--VDGVAARV-VG--E 228
                ..|..:.:..|:::||.:|    |..|..|||   |...|..|:.  :.|.:..: :|  |
  Fly   199 ----QAEEFFHKYAKNMKGYLVR----TPILYDMPRVFKSDRPTNRYEKNFIHGTSGNLFLGFLE 255

  Fly   229 MLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGG------HTHFAPNSRFVL---------DC 278
            .:||::..........|      .|.|.::..:..|      |:.....::||:         ||
  Fly   256 FVNATLMDTSANVTADY------LNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314

  Fly   279 IWPAVEVLYPYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRI 343
            .     ::.||..::     ||.....|.|      :..||.|:.:..|.:.:..::...|:.|.
  Fly   315 C-----IMVPYRNQS-----PADQYMHEAL------QENVWVLISLFTLYITVAIYLCSPLRPRD 363

  Fly   344 PRRGVIQFQAT-WYEILEMFGKTHVGEPAGRLSSFSSMRTFLMGWILFSYVLSTIYFAKLESGFV 407
            .....:|...| .|.:.....:|    |..|      ||...:...::..|.|.:|.:::.|.|.
  Fly   364 LSAAFLQSICTLTYSVPTFIIRT----PTLR------MRYLYILLAIWGIVTSNLYISRMTSYFT 418

  Fly   408 RPSYEEQVDRVDDLVHLDVHIYAVTTMYDAVRSALTEH------QYGLLENRSRQL---PLGIAT 463
            ......|::.|.|:|..::.|..:...|:.:..:..::      |..|::.....|   |...:.
  Fly   419 TAPPVRQINTVQDVVEANLRIKMLAIEYERMAKSPLQYPESYLNQVDLVDKHMLDLHRDPFNTSF 483

  Fly   464 SYYQPVVRRRDRRAAFIMRDFHAR-DFLAITYDSQAERPAYHI----AREYLRSMICTYILPRGS 523
            .|    ....||.....::..|.| ....:|  ...|.|.||:    ...::||::..||:..  
  Fly   484 GY----TVSSDRWRFLNLQQLHLRKPIFRLT--EICEGPFYHVFPLHKDSHMRSVMTEYIMIA-- 540

  Fly   524 PFLHRLESLYSGFLEHGFFEHWRQMDLITRVGASPDAEEFLE---------DLGDQTDTDSGSNE 579
                         .:.|...||             :.|.|.|         .|.|          
  Fly   541 -------------QQAGLMNHW-------------ERETFWEAVHLHRIHVHLFD---------- 569

  Fly   580 LAIRNKKVVLTLDILQGAFYLWSVGIGISCLGFAVE---HAH-WFWRRQTLR 627
                ::.:.|:||........|::|:.::.|.||.|   |.| .|.||..:|
  Fly   570 ----DEPMALSLDFFSSLLRTWTLGLILAGLAFAAEMKWHEHVTFKRRPVIR 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 52/297 (18%)
Ir56dNP_611432.1 ATPase-IIIA_H <312..422 CDD:273731 27/135 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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