DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and Ir52d

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_611042.2 Gene:Ir52d / 36716 FlyBaseID:FBgn0050464 Length:594 Species:Drosophila melanogaster


Alignment Length:719 Identity:130/719 - (18%)
Similarity:219/719 - (30%) Gaps:262/719 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LAEIACRIAVEQ--NVQVTYLYRCA----------------SCPASFDADYSALELDLYRCVGSR 65
            |..:..|:..||  |..:.|...||                |...||:.:||:|.|         
  Fly    33 LLSLLLRLQQEQFFNTLLIYGEDCAFSSLSRRLQVPTILVSSGSTSFEWNYSSLAL--------- 88

  Fly    66 LPVITRNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRILDMLNPHQRRKHMHKYLFVWPNAGR 130
              ::|...:|...|.::....|.             :.|.|.:||.:.:...:..:         
  Fly    89 --ILTCEFKAEREENYQTLKKLQ-------------MNRRLILLNGNIKPDSVCDF--------- 129

  Fly   131 HQLLRLFRGSWAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRF 195
                      ::||..|.:|:....        |...|:....||..|..| .||....|.|:..
  Fly   130 ----------YSKKDQYNIAMVNNN--------FHQVGIIYACRLFQERNY-EKVYLSEGNPIYV 175

  Fly   196 SMFTDPLMAMPRSPVETAGYQAVDGVAARVVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSD 260
            ..|.:...|:.:|                :...::..|:.|..|:..:.        .:.|.|::
  Fly   176 DQFRNMQGALLKS----------------ITFNLIPGSMAYRDPKTGQE--------KHIGYVAN 216

  Fly   261 IVGGHTHFAPNSRFVLD-----------------CIWPAVEVL-------------------YPY 289
            ::   .:|.......||                 ..|.:.:::                   |||
  Fly   217 LL---NNFVEKVNATLDMQVKLHKAGKKTSFYNITKWASEDLVDIGMSYAAYFEMTNFDTISYPY 278

  Fly   290 TRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQAT 354
            ...:...:||...:.|...|::.:....|    ||.|:.:..:|.||....:          |.:
  Fly   279 LMTSTCFMVPLPDMMPNSEIYMGIVDPPV----LVVLIAIFCIFSVMLNYIK----------QRS 329

  Fly   355 WYEILEMFGKTHVGEPAGRLSSFSSMRTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVD 419
            |                   .|.|.:...|....|..::.....|.:            |.:|..
  Fly   330 W-------------------RSLSLVNVLLNDICLRGFLAQPFPFPR------------QSNRKL 363

  Fly   420 DLVHLDVHIYAV--TTMYDAVRSALTEHQYGL-----------LENRSRQLPLGIATSYYQPVVR 471
            .|:.:.|..::|  ||||   .|.|....:|.           |||           |.|:..:|
  Fly   364 KLISMLVCFFSVITTTMY---TSYLQSFMWGPPIDPKMCSFADLEN-----------SRYKLAIR 414

  Fly   472 RRDRRAAFIMRDFHARDFLAITYDSQAERPAYHIAREYLR-SMICTYILPRGS------------ 523
            |.|..   ::|.|:......:.:|..::       .|||| |....|:.|..:            
  Fly   415 RYDIE---MLRPFNVSMDHVVVFDESSQ-------LEYLRDSFDDNYMYPMSALSWSAFKEQQKL 469

  Fly   524 ---PFLHRLESLY---SGFLEHGFFEHWRQMDLITRVGASPDAEEFL---EDLG------DQTDT 573
               |..:..|.|.   ..|.......|....||.         ||.:   .:.|      |::.:
  Fly   470 FAFPLFYYSEKLCLKPISFFSFPIRRHLPYRDLF---------EEHMLQQNEFGLSTYWIDRSFS 525

  Fly   574 DSGSNELAIRNK------KVVLTLDILQGAFYLWSVGIGISCLGFAVE---HAHWFWRRQTLRNA 629
            |....:||..|.      :..:.:..|...|.::..|:||||..|.:|   ...| .||..|.|.
  Fly   526 DMVRLKLATMNDFSPPRLEDYIEVSDLSWVFGMYFTGLGISCCCFGLELLGLPSW-TRRLRLTNW 589

  Fly   630 VEAR 633
            :..|
  Fly   590 LRVR 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 58/320 (18%)
Ir52dNP_611042.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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