DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and Ir48c

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_610700.1 Gene:Ir48c / 36257 FlyBaseID:FBgn0033651 Length:561 Species:Drosophila melanogaster


Alignment Length:617 Identity:127/617 - (20%)
Similarity:218/617 - (35%) Gaps:148/617 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YSALELDLY---RCVGSRLPVITRNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRILDMLNPH 112
            |..|..|||   |..|:...:|..:..:.|.:.:.....|.|.::   |:..:|....||:|..:
  Fly    38 YFGLGNDLYDFSRLDGNYQKIIISHNISEEFKTYHDEPVLIIIRL---ERDLNLNLATLDVLRSY 99

  Fly   113 QRRKHMHKYLFV-----------------WPNAGRHQLLRLFRGSWAKKLLYGLAITGRENGTFD 160
            ...:..:..|.:                 | |||..|:|                |...:..|:.
  Fly   100 LTDRQYNDILLIDNDEENLNSYVDIRKAYW-NAGFSQVL----------------IYNSQQRTWS 147

  Fly   161 FDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRFSMFTDPLMA------MPRSPVETAGYQAVD 219
            ..|:.:  ||:......|....|..::|.|||||..:..||...      :|.||..   |:...
  Fly   148 IKPYPY--LQIRPTSLKEYIENRNTRNLMGYPLRVLVTNDPPHCFVDKDELPGSPNR---YKGSI 207

  Fly   220 GVAARVVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVE 284
            ....::..:.|||:    |..:.....|.....:...:|||    ....|..|.|:....:...:
  Fly   208 VTMLKIFADQLNAT----FQANPFREFRRYSTADCVQMVSD----DEIDACGSIFIRTYTYATSQ 264

  Fly   285 VLYPYTRRNLHLVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVI 349
               |.....:.::.|......::..|.|.|...||   :.|.::||.:. ||..|..|       
  Fly   265 ---PVRLNRVVIMAPFGNPIEKFYYFFRPFDLYVW---IGTGIIVVYIA-VMGSLLHR------- 315

  Fly   350 QFQATWYEILEMFGKTHVGE-----------PAGRLSSFSSMRTFLMGWILFS--YVLSTIYFAK 401
                 |:     |.:.:||:           ....|...||...|::..:||:  ::||.:|.|.
  Fly   316 -----WH-----FKEWNVGQYLLLAVQTLLNRELSLPQSSSGSKFMLLLLLFAIGFILSNLYVAL 370

  Fly   402 LESGFVRPSYEEQVDRVDDLVHLDVHIYAVT------TMYDAVRS------ALTEHQYGLLENRS 454
            |........|:..::.:.||...:|:|...|      ::|.:...      .:.|.|:  ||.|:
  Fly   371 LSMMLTTKLYQRPIENLADLKAANVNILLQTHNIRPNSVYGSSEELRERFLLVEESQH--LEKRN 433

  Fly   455 RQLPLGIATSYYQPVVRRRDRRAAFIMRDFHARDFLAITYDSQAERP-AYHIAREYLRSMICTYI 518
                 |:..||  ..|...||...::    :.:.||......:...| .|..|.:.::.   .::
  Fly   434 -----GLDPSY--AYVDSEDRMDFYL----YQQKFLRRRRMKKLSNPVGYTWAVQVIKQ---NWV 484

  Fly   519 LPRGSPFLHRLESLYSGFLEHGFFEHWRQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIR 583
                      ||..|:..::. |||...|..|:..|........||.....||.|..     .:|
  Fly   485 ----------LEKHYNDHVQR-FFETGLQNKLVDDVHELAVKAGFLHFFPTQTQTIE-----PLR 533

  Fly   584 NKKVVLTLDILQGAFYLWSVGIGISCLGFAVE 615
            .:.:|:...:|.|       |..::.:.|.||
  Fly   534 LEDIVMAAMVLGG-------GHALAVICFLVE 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 61/299 (20%)
Ir48cNP_610700.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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