DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and Ir40a

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:669 Identity:129/669 - (19%)
Similarity:220/669 - (32%) Gaps:239/669 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 ILD----MLNP-HQRRKHMHKYLFV------WPNAGRHQLLRLFRGSWAKKLLYGLAITGRENGT 158
            |||    :||. |.|.......||:      ||.:.|  ::|.      ::.|..:.:|......
  Fly   112 ILDEPNQLLNSLHDRHLGHRLSLFIFYWGARWPPSSR--VIRF------REPLRVVVVTRPRKKA 168

  Fly   159 F-----DFDPFAWGGLQVIQRLDGE---------VPYARKV-KDLRGYPLRFSMFTDP----LMA 204
            |     ...|.:...||::...||:         :|.|..| .:.:|...|..:|..|    :..
  Fly   169 FRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGRTFRVPVFHSPPWFWVTY 233

  Fly   205 MPRSPVETAGYQAVDGVAAR--------------VVGEMLNASVTYVFPEDNESYGRCL------ 249
            ...|..|...:.::|.:..|              ::.:.:|....|:     |:.||..      
  Fly   234 CNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFKYI-----EAPGRTQGSMRSE 293

  Fly   250 ----PNGNYTGVVSDIVGGHTHFAPNSRFVLD--CIW---PAVEVLY----------PYTRRNLH 295
                .|.::||.:..:..|...|     |:.|  ..|   .|:|..:          .:..|.|:
  Fly   294 DGKDSNDSFTGGIGLLQSGQADF-----FLGDVGLSWERRKAIEFSFFTLADSGAFATHAPRRLN 353

  Fly   296 LVVPASAIQPEYLIFVRVFRRTVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQATWYEILE 360
                      |.|..:|.|::.:|..|::|::....:|:            |:|.....|.....
  Fly   354 ----------EALAIMRPFKQDIWPHLILTIIFSGPIFY------------GIIALPYIWRRRWA 396

  Fly   361 MFGKTHVGE-------------------PAGRLSS------------FSSMRTFL---------- 384
            .....|:||                   |...||:            :.::|.||          
  Fly   397 NSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNG 461

  Fly   385 --------MGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYDAVRSA 441
                    :.||..:|||:.:|.|:|.|.|.||:.|..::.:..|....:|        |..|..
  Fly   462 YRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIH--------DGYRLY 518

  Fly   442 LTEHQYGL--LENRS---RQL-----------PLG------------IATSYYQPVVRRRDRRAA 478
            :.:....|  |||.:   |||           |.|            ||.......|........
  Fly   519 VEKESSSLEMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLF 583

  Fly   479 FIMRDFHARDFLAITYDSQAERPAYHIAREYLRSMICTYILPRGSPFLHRLESLYSGFLEHGFFE 543
            |.::.:.:.:|       |..:..|   ..|  |.:...|   |.|||..|.::.....|.|   
  Fly   584 FNVQQYGSNNF-------QLSQKLY---TRY--SAVAVQI---GCPFLGSLNNVLMQLFESG--- 630

  Fly   544 HWRQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVV-------------LTLDILQ 595
                  ::.::.|:..|:::.|  .:.|....||  :..:|.:..             |.|.:||
  Fly   631 ------ILDKMTAAEYAKQYQE--VEATRIYKGS--VQAKNSEAYSRTESYDSTVISPLNLRMLQ 685

  Fly   596 GAFYLWSVGIGISCLGFAV 614
            |||    :.:|:..|...|
  Fly   686 GAF----IALGVGSLAAGV 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 70/363 (19%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 22/131 (17%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 22/120 (18%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 31/172 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463019
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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