DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and Ir25a

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:832 Identity:159/832 - (19%)
Similarity:263/832 - (31%) Gaps:300/832 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GLLLQW---------YLPGIYALAEI---ACR-IAVEQNV-QVTYLYRCASCPASFDADY---SA 53
            |.|.||         ||..:...|:|   |.| |.:..|: ....||     ..||..|:   |.
  Fly   139 GDLRQWRDLDEAKQKYLLQVMPPADIIPEAIRSIVIHMNITNAAILY-----DDSFVMDHKYKSL 198

  Fly    54 LELDLYRCVGSRLPVITRNMEAHELEPFRRTDSLSIFQIPAAEKGDSLVRRILDMLNP--HQRRK 116
            |:....|.|.:.:....:.....::|..|..|..:.|.:...:.    :|.:|:.:.|  .:|..
  Fly   199 LQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFFILGTLQS----IRMVLESVKPAYFERNF 259

  Fly   117 HMH----------------KYLFVWPNA-----GRHQLLR------------------------- 135
            ..|                ..:|:.|.|     .|..|||                         
  Fly   260 AWHAITQNEGEISSQRDNATIMFMKPMAYTQYRDRLGLLRTTYNLNEEPQLSSAFYFDLALRSFL 324

  Fly   136 -----LFRGSWAKKLLY-------GLAITGREN----------------GTFDF-----DPF--- 164
                 |..|:|.|.:.|       | ..|.:.|                ||||.     .||   
  Fly   325 TIKEMLQSGAWPKDMEYLNCDDFQG-GNTPQRNLDLRDYFTKITEPTSYGTFDLVTQSTQPFNGH 388

  Fly   165 -------------AWGGLQV--------IQRLDGE--VPYARKVKDLRGYPLRFSMFTDPLMAMP 206
                         ..||..|        |..|:.|  |....::|:|....: :.:||     :.
  Fly   389 SFMKFEMDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDEEQMKNLTADTV-YRIFT-----VV 447

  Fly   207 RSPV----ETA--GYQAVDGVAARVVGEMLNASVT---YVFPE-DNESYGRCLPNGNYTGVV--- 258
            ::|.    |||  ||:   |....::.|:  |::.   |...| ::..:|....||.:.|:|   
  Fly   448 QAPFIMRDETAPKGYK---GYCIDLINEI--AAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKL 507

  Fly   259 ----SDIVGGHTHFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLI-FVRVFRRTV 318
                :||..|..........|:|...|    .|......:.:..|:|   |..|. |:.|....|
  Fly   508 MDKQADIGLGSMSVMAEREIVIDFTVP----YYDLVGITIMMQRPSS---PSSLFKFLTVLETNV 565

  Fly   319 WYLLLVTLLVVVLVFWVMQRL----------------QRRIPRRGVIQF---QATWYEILEMFGK 364
            |..:|........:.|:..|.                ::|       :|   :..|:.:..:..:
  Fly   566 WLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKR-------EFNLKECLWFCMTSLTPQ 623

  Fly   365 THVGEPAGRLSSFSSMRTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIY 429
            .. ||....||.    |.....|.||.:::...|.|.|.:.......:..|:.:|||......:|
  Fly   624 GG-GEAPKNLSG----RLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILY 683

  Fly   430 A----------------VTTMYDAV--------------RSALTEHQYGLLENRSR--------Q 456
            |                :..|:..:              ||.|....|.:.:..::        :
  Fly   684 APLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAK 748

  Fly   457 LPLGIATSYYQPVVRRRDRRAA---FIMRDFHARDFLAIT------YDSQAERPAYHIA------ 506
            ||    .:..:.|.|.|:..||   ..:.|.....:|.:|      ...:..|..|.||      
  Fly   749 LP----ATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSH 809

  Fly   507 -REYLRSMICTYILPRGSPFLHRLESLYSGFLEHGFFEHWRQMDLITRVGASPDAEEFLEDLGDQ 570
             ::...:.|.|.:..|      :||.|.         |.|.:.|               |.|...
  Fly   810 LKDQFNNAILTLLNKR------QLEKLK---------EKWWKND---------------EALAKC 844

  Fly   571 TDTDSGSNELAIRNKKVVLTLDILQGAFYLWSVGIGISCLGFAVEHAHWFWR 622
            ...:..|:.::|:|         :.|.|.:..||||::|:....|  :|::|
  Fly   845 DKPEDQSDGISIQN---------IGGVFIVIFVGIGMACITLVFE--YWWYR 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 60/346 (17%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 57/296 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 83/446 (19%)
Lig_chan 565..870 CDD:278489 61/359 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463131
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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