DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and GRIK4

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001269399.1 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:604 Identity:111/604 - (18%)
Similarity:195/604 - (32%) Gaps:207/604 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QNVQVTYLYRCASCPASFDADYSALELDLYRCVGSRLPVITRNMEAHELEPFRRTDSLSIFQIPA 94
            |::..::...|...|.:..|..|||..|....|.:.:..:.|:.|. .::|. ...|..|:|   
Human   283 QSLNQSWQENCDHVPFTGPALSSALLFDAVYAVVTAVQELNRSQEI-GVKPL-SCGSAQIWQ--- 342

  Fly    95 AEKGDSLVRRI----LDMLNPH-------QRRKHMHKYLFVWPNAGRHQLLRLFRGSWAKKLLYG 148
              .|.||:..:    |:.|..|       ||..:..|.|....| |..|:     |.|  .:..|
Human   343 --HGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYALKILQFTRN-GFRQI-----GQW--HVAEG 397

  Fly   149 LAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLRFSMFT----------DPLM 203
            |:                        :|..: ||..:.|        ::|.          :|.:
Human   398 LS------------------------MDSHL-YASNISD--------TLFNTTLVVTTILENPYL 429

  Fly   204 AMPRSPVETAGYQAVDGVAARVVGEM-----LNASVTYVFPEDNESYGRCLPNGNYTGVVSDI-- 261
            .:..:..|..|....:|....::.|:     .|..:..|   .:..||....||.:||:|.::  
Human   430 MLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLV---GDGVYGVPEANGTWTGMVGELIA 491

  Fly   262 ------VGGHTHFAPNSRFVLDCIWP----AVEVLYPYTRRNLHLVVPASAIQPEYLIFVRVFRR 316
                  |.|.|..|...: |:|...|    .:.:||     .:|:     ..:|.|..|:..|..
Human   492 RKADLAVAGLTITAEREK-VIDFSKPFMTLGISILY-----RVHM-----GRKPGYFSFLDPFSP 545

  Fly   317 TVWYLLLVTLLVVVLVFWVMQRLQRRIPRRGVIQFQATWYEILEMFGKTHVGEPA--GRLS---- 375
            .||..:|:..|.|..|.:::.||.           ...||.          ..|.  ||.:    
Human   546 GVWLFMLLAYLAVSCVLFLVARLT-----------PYEWYS----------PHPCAQGRCNLLVN 589

  Fly   376 --SFSSMRTFLMG----------------------WILFSYVLSTIYFAKLESGFVRPSYEEQVD 416
              |..:...|.:|                      |..|:.::.:.|.|.|.:.......:..::
Human   590 QYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIE 654

  Fly   417 RVDDLVHLDVHIYAVTTMYDAVRSALTEHQYGLLENRSRQLPLGIATSYYQPVVRRRDRRAAFIM 481
            .||||               |.::|:   :||.:...|                           
Human   655 SVDDL---------------ADQTAI---EYGTIHGGS--------------------------- 674

  Fly   482 RDFHARDFLAITYDSQAERPAYHIAREYLRSMICTYILPRGSPFLHR-LESLYSGFLEHGFFEHW 545
                     ::|:...:....|.....|:.|...:..:......:.| |.|.|:..||....|::
Human   675 ---------SMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYY 730

  Fly   546 RQMDL-ITRVGASPDAEEF 563
            ||.:. :|::|...|.:.:
Human   731 RQRNCNLTQIGGLLDTKGY 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 40/263 (15%)
GRIK4NP_001269399.1 PBP1_iGluR_Kainate_KA1_2 26..400 CDD:107389 32/155 (21%)
ANF_receptor 43..382 CDD:279440 25/105 (24%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 74/424 (17%)
Lig_chan 547..816 CDD:278489 46/278 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155785
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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