DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68b and GRID2

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_011530195.2 Gene:GRID2 / 2895 HGNCID:4576 Length:1035 Species:Homo sapiens


Alignment Length:676 Identity:128/676 - (18%)
Similarity:227/676 - (33%) Gaps:193/676 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QNVQVTYLYRCASCPASFDADYSALELDLYRCVGSRLPVITRNMEAHE-----LEPFRR------ 83
            ||::::.||...:.....:|.:..||...:..:.| |..|.:|.:..:     ||..::      
Human   330 QNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMAS-LSCIRKNSKPWQGGRSMLETIKKGGVSGL 393

  Fly    84 TDSLSI----------FQIPAAEKGDSLVRRILDMLNPHQRRKHMHKYLFVWPNAGRHQLLRLFR 138
            |..|..          |:|.....|:.|.|.:    ..::|.:.......:||     ||     
Human   394 TGELEFGENGGNPNVHFEILGTNYGEELGRGV----RKNERIRPQGSTGKIWP-----QL----- 444

  Fly   139 GSWAKKLLYGLAITGRENGTFDFDPFAWGGLQVIQRLDGEVPYARKVKDLRGYPLR--------F 195
            |.|.       .:||                     |:|.:...:...::||..||        |
Human   445 GCWN-------PVTG---------------------LNGSLTDKKLENNMRGVVLRVVTVLEEPF 481

  Fly   196 SMFTDPLMAMPRSPVETAGYQAVDGVAARVVGEMLN----ASVTYVFPEDNESYGRCLPNGNYTG 256
            .|.::.::..|:.      ||   |.:..|:..:.|    ....||.|:  ..||....:|.:.|
Human   482 VMVSENVLGKPKK------YQ---GFSIDVLDALSNYLGFNYEIYVAPD--HKYGSPQEDGTWNG 535

  Fly   257 VVSDIVGGHTHFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLI----FVRVFRRT 317
            :|.::|........::.    .|.|..|.:..:|.|.:...|.....:.|..:    .:..|..:
Human   536 LVGELVFKRADIGISAL----TITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLS 596

  Fly   318 VWYLLLVTLLVVVLVFWVMQRLQRRIPR------RGVIQFQATWYEILEMFGKTHVGEPAGRLSS 376
            :|..:..|:|:|.|:.:::..|..  ||      .....:.:.|:    ::|.  ..:..|.:..
Human   597 LWACIAGTVLLVGLLVYLLNWLNP--PRLQMGSMTSTTLYNSMWF----VYGS--FVQQGGEVPY 653

  Fly   377 FSSMRTFLMG-WILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDL---------VHLDVHIYAV 431
            .:.....:|| |.||:.::.:.|.|.|.:.......|..:..:.||         ..||..:|..
Human   654 TTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEH 718

  Fly   432 TTMYDA---VRSALTEHQYGLL------ENRSRQLPLGIATSYYQPVVRRRDRRAAFIMRDFHAR 487
            ..|...   .|.::....:.::      ||...:...||....|        ...||:. |....
Human   719 VRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKY--------GNYAFVW-DAAVL 774

  Fly   488 DFLAI--------TYDSQAERPAYHIAREYLRSMICTYILPRGSP----FLHRLESLYSG----F 536
            :::||        |..:......|.||            |..|||    |..|:..|...    .
Human   775 EYVAINDPDCSFYTIGNTVADRGYGIA------------LQHGSPYRDVFSQRILELQQNGDMDI 827

  Fly   537 LEHGFFEHWRQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYLW 601
            |:|.::....|.||.:.|                 ||......|.|::         ..|.|.:.
Human   828 LKHKWWPKNGQCDLYSSV-----------------DTKQKGGALDIKS---------FAGVFCIL 866

  Fly   602 SVGIGISCLGFAVEHAHWFWRRQTLR 627
            :.||.:||  |......|:.:|:..|
Human   867 AAGIVLSC--FIAMLETWWNKRKGSR 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 57/314 (18%)
GRID2XP_011530195.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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