DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir68b and GRID1

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:525 Identity:102/525 - (19%)
Similarity:180/525 - (34%) Gaps:145/525 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 RENGTFDFDPFAWGGLQ---VIQRLDG---------EVPYARKVKDLRGYPLRFSMFT-DPLMAM 205
            |:..|:|.:....|.||   :..||.|         |.|:....:::.|.|.|:..|: |.|.|:
Human   410 RKLATWDSEKGLNGSLQERPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDAL 474

  Fly   206 PRSPVETAG-----YQAVDGVAARVVGEMLNASVTYVFPEDNESYGRCLPNGNYTGVVSDIVGGH 265
            .::    .|     |||.||                       .||..|.|.::.|::.:::...
Human   475 AKA----LGFKYEIYQAPDG-----------------------RYGHQLHNTSWNGMIGELISKR 512

  Fly   266 THFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLIFV----RVFRRTVWYLLLVTL 326
            ...|.::    ..|.|..|.:..:::|.:...|.....:||..|.:    ..|...||..:...:
Human   513 ADLAISA----ITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIAAAI 573

  Fly   327 LVVVLVFWVMQRLQ--------RRIPRRGVIQFQATWY---EILEMFGKTHVGEPAGRLSSFSSM 380
            .||.::.:|:.|:|        :..|........|.|.   ..::..|::.|...|        |
Human   574 PVVGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMA--------M 630

  Fly   381 RTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDL---VHLDVHIYAVTTMYDAVRSAL 442
            |..:..|.||:.::.:.|.|.|.:.......:..:....||   |.:.......:.:|:..|:..
Human   631 RIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKG 695

  Fly   443 TEHQYGLLENRSRQLPL-----------GIATSYYQPVVRRRDRRAAFIMRDFHARDFLAITYD- 495
            |..    ||..|....|           ...:|..:.:.:.:....||:. |....::.|:|.| 
Human   696 TNP----LEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLW-DVAVVEYAALTDDD 755

  Fly   496 -------SQAERPAYHIAREYLRSMICTYILPRGSP----FLHRLESLYS----GFLEHGFFEHW 545
                   :......|.||            |..|||    |..|:..|..    ..|:..::.|.
Human   756 CSVTVIGNSISSKGYGIA------------LQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHM 808

  Fly   546 RQMDLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQGAFYLWSVGIGISCL 610
            .:.||.:...|..|.:.                          |.|....|.|.:.::|:.::||
Human   809 GRCDLTSHASAQADGKS--------------------------LKLHSFAGVFCILAIGLLLACL 847

  Fly   611 GFAVE 615
            ..|:|
Human   848 VAALE 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 55/314 (18%)
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 8/25 (32%)
PBP1_iGluR_delta_1 25..423 CDD:107387 3/12 (25%)
ANF_receptor 41..400 CDD:279440
PBP2_iGluR_delta_1 436..806 CDD:270448 80/425 (19%)
Lig_chan 564..841 CDD:278489 58/327 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155877
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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