DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir68b and Samd3

DIOPT Version :9

Sequence 1:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_006512805.1 Gene:Samd3 / 268288 MGIID:2685469 Length:527 Species:Mus musculus


Alignment Length:75 Identity:20/75 - (26%)
Similarity:29/75 - (38%) Gaps:25/75 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 HELEPFRRT--DSLSIFQIPAAEKGDSLVRRILDMLNPHQRR--KHMHKYLFVWPNAGRHQLLRL 136
            ||..|...:  |..|::  ||.     |..|::|.....|||  ||:         ..||:.|: 
Mouse   104 HEQNPSPTSHGDQTSLY--PAV-----LDNRLIDQRVLKQRRNVKHV---------LARHKALQ- 151

  Fly   137 FRGSWAKKLL 146
                |.|..:
Mouse   152 ----WTKSYI 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489
Samd3XP_006512805.1 SAM_Samd3 14..79 CDD:188925
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1945
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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