DRSC/TRiP Functional Genomics Resources

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Protein Alignment yps and cspH

DIOPT Version :10

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_415509.1 Gene:cspH / 945590 ECOCYCID:G6510 Length:70 Species:Escherichia coli


Alignment Length:77 Identity:33/77 - (42%)
Similarity:42/77 - (54%) Gaps:16/77 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 IATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEV------VEFDV 116
            ::.|:||.||.|:.|||.|||..:|.|::|.||.||.   .|:       |.||      |||..
E. coli     1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAF---TPR-------DAEVLIPGLRVEFCR 55

  Fly   117 VIGEKGNEAANV 128
            |.|.:|..||||
E. coli    56 VNGLRGPTAANV 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729 32/73 (44%)
cspHNP_415509.1 S1_like 1..70 CDD:471952 33/77 (43%)

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