Protein Alignment yps and ybx1

DIOPT Version :9

• Sequence 1: NP_524033.2
• Gene: yps / 39377
• FlyBaseID: FBgn0022959
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_571695.1
• Gene: ybx1 / 795398
• ZFINID: ZDB-GENE-000629-3
• Length: 310
• Species: Danio rerio
• Alignment Length: 323
• Identity: 134/323 - (41%)
• Similarity: 170/323 - (52%)
• Gaps: 69/323 - (21%)

  Fly    12 AEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPT---KEVIATKVTGTVKWFNVKS 73
            ||.||..|.....::|.:|                   .|..|   |:||||||.||||||||::
Zfish     5 AETQQPPQPAADAESPSSP-------------------AAAATAGDKKVIATKVLGTVKWFNVRN 50

  Fly    74 GYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRG 138
            ||||||||||:|||||||:||.:|||:|.:|||||||.||||||.||||.||||||||.|.||:|
Zfish    51 GYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQG 115

  Fly   139 SQFAADKRRNFR-PWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQNF 202
            |::|||:.|..| |..:...|...|....|.|:..:::::.|....:|:.||| |..|..|
Zfish   116 SKYAADRNRYRRYPRRRAPPRDYQENYQSDPEAEPREKREGAESAPEGEMQQQ-QRRPTYP---- 175

  Fly   203 RRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVHDQNPEGLQRGE 267
                                     |.|||..|::|  ||     .|...|..:.|..|..:.||
Zfish   176 -------------------------GRRRYPPYFVR--RR-----YGRRPPYTNSQRGEMTEGGE 208

  Fly   268 GQGPRRGGGPPGG--PQRRFFRRNF--NNGPPPPR--RDGGEYIQGQGPP-RPQQPRPRRQRK 323
            |:  ...|||..|  |.|:.:.|.|  :.|||.||  |||.|..:.|... :.|:||.||.|:
Zfish   209 GE--ENQGGPDQGNKPMRQNYYRGFRPSRGPPRPRPVRDGEEDKENQSESGQNQEPRQRRYRR 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	55/68 (81%)
ybx1	NP_571695.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..31		9/44 (20%)
		CSD	39..108	CDD:278729	55/68 (81%)
		C5-methylcytosine binding. /evidence=ECO:0000269|PubMed:31399345, ECO:0007744|PDB:6A6J	45..50		4/4 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	102..310		69/207 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	118	1.000	Domainoid score	I5803
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	184	1.000	Inparanoid score	I3936
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100504
Panther	1	1.100	-	-	O	PTHR11544
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R5264
SonicParanoid	1	1.000	-	-		X470
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	10	9.890