Protein Alignment yps and lin28a

DIOPT Version :9

• Sequence 1: NP_524033.2
• Gene: yps / 39377
• FlyBaseID: FBgn0022959
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001016266.1
• Gene: lin28a / 548523
• XenbaseID: XB-GENE-491384
• Length: 195
• Species: Xenopus tropicalis
• Alignment Length: 109
• Identity: 41/109 - (37%)
• Similarity: 56/109 - (51%)
• Gaps: 21/109 - (19%)

  Fly    63 TGTVKWFNVKSGYGFINRN-------DTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGE 120
            :|..|||||:.|:||:...       :|..|||||||.:    ..:..||:.:||.|||......
 Frog    35 SGVCKWFNVRMGFGFLTMTKKEGTDLETPVDVFVHQSKL----HMEGFRSLKEGESVEFTFKKSS 95

  Fly   121 KGNEAANVTGPSGEPVRGSQFAADKRRNFRPWMK--KNRRKDGE 162
            ||.|:..||||.|.|..||:        .||.:|  :.||:.|:
 Frog    96 KGLESTRVTGPGGAPCIGSE--------RRPKVKGQQKRRQKGD 131

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	29/74 (39%)
lin28a	NP_001016266.1	CSP_CDS	36..105	CDD:239905	28/72 (39%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	98..126		12/35 (34%)
		Flexible linker. /evidence=ECO:0000250	107..130		9/30 (30%)
		PTZ00368	<124..176	CDD:173561	3/8 (38%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	175..195

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1604809at2759
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920