DRSC/TRiP Functional Genomics Resources

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Protein Alignment yps and YBX2

DIOPT Version :10

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_016880202.1 Gene:YBX2 / 51087 HGNCID:17948 Length:379 Species:Homo sapiens


Alignment Length:336 Identity:127/336 - (37%)
Similarity:159/336 - (47%) Gaps:94/336 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GQPAPPT-----KEVIATKVTGTVKWFNVKSGYGFINRNDTREDVFVHQ---------------S 92
            |.||||.     |.|:|.:|.||||||||::||||||||||:|||||||               :
Human    75 GTPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQLENHCLVERALTGTET 139

  Fly    93 AIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKRRNFR------- 150
            ||.||||:|.:|||||||.||||||.||||.||.|||||.|.||:||::|.::|::.|       
Human   140 AIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRRKSRRFIPRPPS 204

  Fly   151 ---PWMKKNRRKDGE---VEGEDAESSAQQQQQQAAPIVDGQP---QQQVQSGPRQPRQNFRRGP 206
               |.|.......|.   .:||.||.|.|:.::...|     |   :::...|||.|.|   :.|
Human   205 VAPPPMVAEIPSAGTGPGSKGERAEDSGQRPRRWCPP-----PFFYRRRFVRGPRPPNQ---QQP 261

  Fly   207 PGG----------PPGG--PRGGPRGPPGGAPGGPR---RYNNYYLRQPRR--GLGGGDGSAEPG 254
            ..|          |..|  .:|..|.||      ||   ||...:..:||:  ...||||..:| 
Human   262 IEGTDRVEPKETAPLEGHQQQGDERVPP------PRFRPRYRRPFRPRPRQQPTTEGGDGETKP- 319

  Fly   255 VHDQNPEGLQRGEGQGPRRGGGP-PGGPQRR-FFRRNFNNGPPPPRRDGGEYIQGQGPPRPQQPR 317
                         .|||..|..| |..|:.| :|:|.....|.|           |..|.|:||.
Human   320 -------------SQGPADGSRPEPQRPRNRPYFQRRRQQAPGP-----------QQAPGPRQPA 360

  Fly   318 PRRQRKPNGPG 328
            ......|...|
Human   361 APETSAPVNSG 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729 55/83 (66%)
YBX2XP_016880202.1 CSD 94..178 CDD:278729 55/83 (66%)
PRK12323 <319..>367 CDD:481241 18/72 (25%)

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