Protein Alignment yps and Lin28a

DIOPT Version :9

• Sequence 1: NP_524033.2
• Gene: yps / 39377
• FlyBaseID: FBgn0022959
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001102739.1
• Gene: Lin28a / 500562
• RGDID: 1566408
• Length: 209
• Species: Rattus norvegicus
• Alignment Length: 165
• Identity: 51/165 - (30%)
• Similarity: 63/165 - (38%)
• Gaps: 50/165 - (30%)

  Fly     2 ADAAESKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTV 66
            |.|||..|..|....|:...|.|.                 |.|                 .|..
  Rat    14 AKAAEKAPEEAPADAARAADEPQL-----------------LHG-----------------AGIC 44

  Fly    67 KWFNVKSGYGFINRN-------DTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNE 124
            |||||:.|:||::..       |...|||||||.:    ..:..||:.:||.|||......||.|
  Rat    45 KWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFTFKKSAKGLE 105

  Fly   125 AANVTGPSGEPVRGSQFAADKRRNFRPWMKKNRRK 159
            :..||||.|....||:     ||.....|:|.|.|
  Rat   106 SIRVTGPGGVFCIGSE-----RRPKGKSMQKRRSK 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	29/75 (39%)
Lin28a	NP_001102739.1	CSD	42..112	CDD:278729	29/73 (40%)
		AIR1	<120..>183	CDD:227414	7/21 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1604809at2759
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.920