DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yps and CG9705

DIOPT Version :9

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001261972.1 Gene:CG9705 / 39875 FlyBaseID:FBgn0036661 Length:143 Species:Drosophila melanogaster


Alignment Length:88 Identity:25/88 - (28%)
Similarity:38/88 - (43%) Gaps:2/88 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SKPLAAEQQQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTVKWFNV 71
            ::|...|:..|.:.|....|..:|........|:  :..:....:...:.:....|||.||.|:.
  Fly     2 TEPRTPEKLLAAKPPVLHHNSHSPNASLQLPSPI--ITRRTRTASTSARALENPVVTGMVKSFSR 64

  Fly    72 KSGYGFINRNDTREDVFVHQSAI 94
            ..|:|||..|...||||.|.|.|
  Fly    65 TKGHGFITPNAGGEDVFCHVSDI 87

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729 18/33 (55%)
CG9705NP_001261972.1 CSP_CDS 55..120 CDD:239905 18/33 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1278
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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