Protein Alignment yps and LIN28B

DIOPT Version :9

• Sequence 1: NP_524033.2
• Gene: yps / 39377
• FlyBaseID: FBgn0022959
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: XP_006715540.2
• Gene: LIN28B / 389421
• HGNCID: 32207
• Length: 269
• Species: Homo sapiens
• Alignment Length: 276
• Identity: 70/276 - (25%)
• Similarity: 103/276 - (37%)
• Gaps: 60/276 - (21%)

  Fly    15 QQAQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTVKWFNVKSGYGF-- 77
            |:..:...|..:.|....:...:||     |:..:||....:|:  :.||..|||||:.|:||
Human     9 QKRMRSFNQVSSAPGGASKGGGEEP-----GKLPEPAEEESQVL--RGTGHCKWFNVRMGFGFIS 66

  Fly    78 -INRN----DTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVR 137
             |||.    |...|||||||.:.    .:..||:.:||.|||......||.|:..||||.|.|..
Human    67 MINREGSPLDIPVDVFVHQSKLF----MEGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCL 127

  Fly   138 GSQFAADKRRNFRPWMKKNRRKD-----GEVEGEDAESSAQQQQ------QQAAPIVDGQPQQQV 191
            ||    ::|...:...|:..:.|     |.::....|.|...|.      |....:|...|.:.|
Human   128 GS----ERRPKGKTLQKRKPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNV 188

  Fly   192 QSGPRQPRQNFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQPRRGLGGGDGSAEPGVH 256
            ..                           ||..:.|.....:........|.:|||.|...|...
Human   189 AQ---------------------------PPASSQGRQEAESQPCTSTLPREVGGGHGCTSPPFP 226

  Fly   257 DQNPEGLQRGEGQGPR 272
            .:....:....|:.|:
Human   227 QEARAEISERSGRSPQ 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	33/75 (44%)
LIN28B	XP_006715540.2	CSP_CDS	50..120	CDD:239905	32/73 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1604809at2759
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	4	3.820