DRSC/TRiP Functional Genomics Resources

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Protein Alignment yps and CSDC2

DIOPT Version :9

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_055275.1 Gene:CSDC2 / 27254 HGNCID:30359 Length:153 Species:Homo sapiens


Alignment Length:105 Identity:29/105 - (27%)
Similarity:39/105 - (37%) Gaps:32/105 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PAP-PTKEVIATKVT----------GTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAV 103
            |:| |||.......|          |..|.|:...|:|||...:..||:|||.|.|         
Human    46 PSPLPTKRTRTYSATARASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDI--------- 101

  Fly   104 RSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143
                :||.|..:      |:|......|.  |.:..:|.|
Human   102 ----EGEYVPVE------GDEVTYKMCPI--PPKNQKFQA 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729 20/78 (26%)
CSDC2NP_055275.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 6/15 (40%)
CSP_CDS 70..134 CDD:239905 23/81 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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