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Protein Alignment yps and Carhsp1
DIOPT Version :9
Sequence 1: | NP_524033.2 |
Gene: | yps / 39377 |
FlyBaseID: | FBgn0022959 |
Length: | 352 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038941233.1 |
Gene: | Carhsp1 / 260416 |
RGDID: | 708415 |
Length: | 225 |
Species: | Rattus norvegicus |
Alignment Length: | 156 |
Identity: | 40/156 - (25%) |
Similarity: | 53/156 - (33%) |
Gaps: | 56/156 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 172 AQQQQQQAAPIVDGQPQQQVQSGPRQPRQNFRRGPPGGPPGGPRGGPRGPPGGAPG------GPR 230
:|.|.|..|.:|.| || |.|.:: |.|||..||| .|.
Rat 45 SQSQGQVGARLVLG-------SG-RHPLRD----------------PIGPPSRAPGPHWASADPL 85
Fly 231 RYNNYYLRQPRRGLGGGDGSAEPGVHDQNPEGLQRGEGQGPRRGGGPPGGPQRRFFRRNFNNGPP 295
....:.|..|...| |.||:.::.|.. ...|| ...|.||.: .
Rat 86 GVGEHLLSLPSPAL------ASPGLQNKGPVA-----AAAPR--SSYPAGPVQ-----------A 126
Fly 296 PPRRDGGEYIQGQGPPRP--QQPRPR 319
|.|...|..::|..|..| |:|||:
Rat 127 PGRASIGPELKGAWPHTPPCQRPRPQ 152
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
yps | NP_524033.2 |
CSD |
62..131 |
CDD:278729 |
|
Carhsp1 | XP_038941233.1 |
PHA03247 |
<63..169 |
CDD:223021 |
31/130 (24%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1278 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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