DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment yps and Ybx1

DIOPT Version :9

Sequence 1:	NP_524033.2	Gene:	yps / 39377	FlyBaseID:	FBgn0022959	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	XP_006502996.1	Gene:	Ybx1 / 22608	MGIID:	99146	Length:	326	Species:	Mus musculus

Alignment Length:	374	Identity:	136/374 - (36%)
Similarity:	181/374 - (48%)	Gaps:	103/374 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 QPEQQQNPPNPQEQDHEQEPLDELQGQQGQ--------------PAPPTKEVIATKVTGTVKWFN 70
            :.|.||.|..|..   .....|...|..|.              ||...|:||||||.|||||||
Mouse     4 EAETQQPPAAPAA---ALSAADTKPGSTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGTVKWFN 65

  Fly    71 VKSGYGFINRNDTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEP 135
            |::||||||||||:|||||||:||.:|||:|.:|||||||.||||||.||||.||||||||.|.|
Mouse    66 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVP 130

  Fly   136 VRGSQFAADKRRNFRPWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQPRQ 200
            |:||::|||:....|...::...::.:...:::||..:.:..::||  :||.||         |:
Mouse   131 VQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAP--EGQAQQ---------RR 184

  Fly   201 NFRRGPPGGPPGGPRGGPRGPPGGAPGGPRRYNNYYLRQP--RRGLGGGDGSAEPGVHDQNPEGL 263
            .:||                         ||:..||:|:|  ||     ...:.|.|..:..||
Mouse   185 PYRR-------------------------RRFPPYYMRRPYARR-----PQYSNPPVQGEVMEG- 218

  Fly   264 QRGEGQGPRRGGGPPGGPQR----RFFRRNFNN----GPP---PPRRDG--------GEYIQGQG 309
                  ...:|.|..|.|.|    |.:|..|.:    |||   .||.||        |:..|||.
Mouse   219 ------ADNQGAGEQGRPVRQNMYRGYRPRFRSIHFRGPPRQRQPREDGNEEDKENQGDETQGQQ 277

  Fly   310 PP-------------RPQQPRPR--RQRKPNGPGGGSEQQP--EKNGAQ 341
            ||             ||:.|:|:  ::.|...|...:...|  |:.||:
Mouse   278 PPQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE 326

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	55/68 (81%)
Ybx1	XP_006502996.1	CSD	57..126	CDD:278729	55/68 (81%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	119	1.000	Domainoid score	I5779
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	186	1.000	Inparanoid score	I3913
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	1	1.000	-	-		otm43668
orthoMCL	1	0.900	-	-		OOG6_100504
Panther	1	1.100	-	-	O	PTHR11544
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R5264
SonicParanoid	1	1.000	-	-		X470
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	12	11.890