DRSC/TRiP Functional Genomics Resources

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Protein Alignment yps and K08D12.3

DIOPT Version :9

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_741323.1 Gene:K08D12.3 / 176979 WormBaseID:WBGene00019537 Length:151 Species:Caenorhabditis elegans


Alignment Length:116 Identity:32/116 - (27%)
Similarity:37/116 - (31%) Gaps:45/116 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 RQPRQNFRRGPPGGPPGGPRGGPRG----------------PPGGAPGGPRRYNNYYLRQPRRGL 244
            :||....|..|.|...||.|||..|                |.||:.||            :||.
 Worm    10 QQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGG------------QRGG 62

  Fly   245 GGGDGSAE------------PGVHDQNPEGLQRGEGQGPRRGGGPPGGPQR 283
            |||.||..            |....:...|     |.|.|.|.|...|.|:
 Worm    63 GGGGGSCYNCGGRGHYSRDCPSARSEGGSG-----GYGGRGGEGRSFGGQK 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729
K08D12.3NP_741323.1 PTZ00368 1..148 CDD:173561 32/116 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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