DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment yps and ybx2

DIOPT Version :9

Sequence 1:	NP_524033.2	Gene:	yps / 39377	FlyBaseID:	FBgn0022959	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_001123667.1	Gene:	ybx2 / 100170415	XenbaseID:	XB-GENE-5798907	Length:	337	Species:	Xenopus tropicalis

Alignment Length:	357	Identity:	137/357 - (38%)
Similarity:	178/357 - (49%)	Gaps:	68/357 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 AQQQPEQQQNPPNPQEQDHEQEPLDELQGQQGQPAPPTKEVIATKVTGTVKWFNVKSGYGFINRN 81
            ::.:|.:.:....|:.....|:|.......|     |.|:|:||:|.||||||||::||||||||
Frog     2 SEAEPREPEPVLEPESAPEIQKPTISAARNQ-----PNKKVLATQVQGTVKWFNVRNGYGFINRN 61

  Fly    82 DTREDVFVHQSAIARNNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAADKR 146
            ||:|||||||:||.||||:|.:|||||||.||||||.||||.||||||||.|.||:||:||.::|
Frog    62 DTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRFAPNRR 126

  Fly   147 RNFRPWMKKNRRKDGEVEGEDAESSAQQQQQQAAPIVDGQPQQQVQSGPRQP-----RQNFRRGP 206
            |..|.:.:......||..||..   :.:|..:.....:|.||||.:...|:|     |:.|||||
Frog   127 RFRRRFYRPRADTAGESGGEGV---SPEQMSEGERGEEGSPQQQQRPQRRRPPPFFYRRRFRRGP 188

  Fly   207 PGGPPGGPRGG-----------PRGPPG--GAPGG------PRRYNNYYLR--QPRRGLGGGDGS 250
              .||.....|           |..|..  .|.|.      |||:...:.|  :||
Frog   189 --RPPNQQSQGSEANDQSENKDPAAPVSEVSASGDDQQRPPPRRFRQRFRRPFRPR--------- 242

  Fly   251 AEPGVHDQNPEGLQRGEGQGPRR--GGGPPGGPQRR----FFRRNFNNGPPPPRRDGGEYIQGQG 309
            ..|   .|.|||   |:|: |:.  |.||...|||:    :|:|....|..|.:...    ||.|
Frog   243 PSP---QQTPEG---GDGE-PKAAPGEGPRPEPQRQRTRPYFQRRRRQGAAPVQPTA----QGDG 296

  Fly   310 PPRPQQPRPRRQRKP-----NGPGGGSEQQPE 336
            ...|.| .|..:..|     :|........||
Frog   297 KAEPTQ-HPVSEGPPADSPTDGDAADQTSAPE 327

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
yps	NP_524033.2	CSD	62..131	CDD:278729	56/68 (82%)
ybx2	NP_001123667.1	CSD	42..111	CDD:278729	56/68 (82%)
ybx2	NP_001123667.1	PRK07764	<193..336	CDD:236090	39/156 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	122	1.000	Domainoid score	I5576
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	184	1.000	Inparanoid score	I3825
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	1	1.000	-	-		otm48843
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X470
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	6.050