DRSC/TRiP Functional Genomics Resources

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Protein Alignment yps and csdc2

DIOPT Version :10

Sequence 1:NP_524033.2 Gene:yps / 39377 FlyBaseID:FBgn0022959 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001093718.1 Gene:csdc2 / 100101738 XenbaseID:XB-GENE-489696 Length:151 Species:Xenopus tropicalis


Alignment Length:105 Identity:29/105 - (27%)
Similarity:39/105 - (37%) Gaps:32/105 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PAP-PTKEVIATKVT----------GTVKWFNVKSGYGFINRNDTREDVFVHQSAIARNNPKKAV 103
            |:| |||.......|          |..|.|:...|:|||...:..||:|||.|.|         
 Frog    44 PSPLPTKRTRTYSATARASAGPIYKGVCKQFSRSQGHGFITPENGTEDIFVHISDI--------- 99

  Fly   104 RSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143
                :||.|..:      |:|......|.  |.:..:|.|
 Frog   100 ----EGEYVPVE------GDEVTFKMCPI--PPKNQKFQA 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ypsNP_524033.2 CSD 62..131 CDD:278729 20/78 (26%)
csdc2NP_001093718.1 CSP_CDS 67..132 CDD:239905 23/82 (28%)

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