Protein Alignment CG11560 and ssp

DIOPT Version :9

• Sequence 1: NP_001303392.1
• Gene: CG11560 / 39376
• FlyBaseID: FBgn0036249
• Length: 307
• Species: Drosophila melanogaster
• Sequence 2: NP_648546.1
• Gene: ssp / 39375
• FlyBaseID: FBgn0036248
• Length: 368
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 80/335 - (23%)
• Similarity: 115/335 - (34%)
• Gaps: 139/335 - (41%)

  Fly    23 EAQLDILMKINSGEYRLVKKNKRSSVWNVYREIARPDGTKLKWRYFCMGCKRVMQSTGGTTSNLR 87
            |:...|..|:..|||||:::.:|.|||.|||||.|.||..:...|||.||||||:|.  .|||||
  Fly    14 ESNQVISAKVLRGEYRLLRRKQRGSVWKVYREIVRTDGAIINGLYFCTGCKRVMRSF--NTSNLR 76

  Fly    88 IHKCHVRYIKQNGHLTDGSHSYDHDPAPPAS----------QPS--------------------- 121
            .|||||.|::.. .|.:...:..|.|....|          |||
  Fly    77 THKCHVDYLRTE-ELCEEGIAEIHPPKLDDSLERRLSWNSFQPSEWSFHAVELLLELWARHCVDL 140

  Fly   122 ----PRVQ--------------------------------KPKTRRPTSYSTQCEQFYEVTM--- 147
                .|||                                :....:.|.:.:|.|.|..:.|
  Fly   141 RDSRKRVQVIWKMTGEMKSLGFTFTEIKNKIDDMGQQYRRESHMEKTTGHKSQWEYFETMKMIFS 205

  Fly   148 ----------------DPETQY------SDLDDEI--------------------------EASL 164
                            .|.|..      |.||:.:                          ||..
  Fly   206 SDRNIIDNMPLDKSGSAPNTTSEHNSFGSQLDEPLIDRNYLRSQKVHPGEGDSFDMNEYADEAQE 270

  Fly   165 EEEQTIILQLKSKRELESSHSRPLLKLFSEENLSTEPEEPEDEIE------------IVEAEDQ- 216
            :.::..||:....||:|.|.:     :.|:||...|.::...:.|            |:|.|::
  Fly   271 DVDELRILKDNIIREIEESST-----VHSQENYEDELDQQNSKTEDMKIAKRQRAARIMEIEEEK 330

  Fly   217 VPIELDLCDI 226
            :.||...|.:
  Fly   331 LVIERKKCKL 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11560	NP_001303392.1	ZnF_BED	48..93	CDD:214746	28/44 (64%)
ssp	NP_648546.1	Myb_DNA-bind_4	120..198	CDD:290549	6/77 (8%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0012715
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.000