DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp and Y105C5A.15

DIOPT Version :9

Sequence 1:NP_648546.1 Gene:ssp / 39375 FlyBaseID:FBgn0036248 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001294099.1 Gene:Y105C5A.15 / 178442 WormBaseID:WBGene00013639 Length:859 Species:Caenorhabditis elegans


Alignment Length:478 Identity:72/478 - (15%)
Similarity:150/478 - (31%) Gaps:171/478 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GEYRLLRRKQRGSVWKVYREIVRTDGAIINGLYFCTGCKRVMRSF--NTSNLRTHKCHV------ 82
            |.::|:|::.|..||.::.:::.:...:......|..||.:....  .|.|:..|:|.:      
 Worm   234 GRFQLVRKRGRSEVWNLFGQVLDSLTQVRLPFVACYACKVLYTDTGGGTGNMTRHRCPIGASYRS 298

  Fly    83 -DYLRTEELCEEGIAEIHPPKLDDSLERRL----------------------------SWNSFQP 118
             .:..:.|..|.|...    ..|.::..|:                            |.||..|
 Worm   299 STHASSTETVEAGGTN----SFDSAISARIMSSADVTRSQLSISMVESGSGSGPSGSGSGNSSLP 359

  Fly   119 -----SEWSFHAV------ELLLELWARHC-VDLRD----SRKRVQVIWKMTGEMKSLG------ 161
                 |...|...      |:|.:...:.| :||.|    |.|..:.:.|....:...|      
 Worm   360 LLTQHSGEEFQNTIGDVDREVLTDAIVKCCALDLIDPMVFSGKGFRSLLKQICHVSKRGGVSPPI 424

  Fly   162 ------------------FTFTEIKNKIDDMGQQYRRESHMEKTTG------HKSQ----WEYFE 198
                              |...::||::....|..|........:|      |.|:    |::..
 Worm   425 DAFPDIQTVRSAMQTHLRFCADDLKNELSRTTQGCRLALETLTYSGRDYRVIHGSRISPDWKWRS 489

  Fly   199 TMKMIFSSDRN---------IIDNMPLDKSG---SAPNTTSE-------------------HNSF 232
            .:..:|.:..|         ::.|..|:::.   :.||:.::                   ..:|
 Worm   490 NILGVFKAKENESLNEMINLVVHNYELNRTFLRITIPNSNNDLEGNVKCFFDIKAKLKEILFTTF 554

  Fly   233 GS-------------QLDEPLIDRNYLRSQKVHPGEGDSFDMNEYADEAQEDVDELRIL-----K 279
            .:             ||.:.|::.:........|.| |.||::....|..:...:|..:     .
 Worm   555 SACSQPVMDMLNAVDQLTKALVEMDVRLPFATEPRE-DIFDVHNLLAEWNDQWGQLEQIISTKCA 618

  Fly   280 DNIIREIEESSTVHSQE--------------------NY----------EDELDQQNSKTEDMKI 314
            |.::...::....|.::                    |:          :.|...||.:...:..
 Worm   619 DTLLENFKKLDPTHMRDLEVFILPFRETIESLTSEHPNFHKILPEWLALQHECQVQNDEPTALLR 683

  Fly   315 AKRQRAARIMEIEEEKLVIERKK 337
            ..:|.|.:::|.|:||::.:..:
 Worm   684 ELKQIATKVLESEKEKIMTDEHR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sspNP_648546.1 Myb_DNA-bind_4 120..198 CDD:290549 20/122 (16%)
Y105C5A.15NP_001294099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012715
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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