DRSC/TRiP Functional Genomics Resources

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Protein Alignment ssp and Y105C5A.15

DIOPT Version :10

Sequence 1:NP_648546.1 Gene:ssp / 39375 FlyBaseID:FBgn0036248 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001294099.1 Gene:Y105C5A.15 / 178442 WormBaseID:WBGene00013639 Length:859 Species:Caenorhabditis elegans


Alignment Length:478 Identity:72/478 - (15%)
Similarity:150/478 - (31%) Gaps:171/478 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GEYRLLRRKQRGSVWKVYREIVRTDGAIINGLYFCTGCKRVMRSF--NTSNLRTHKCHV------ 82
            |.::|:|::.|..||.::.:::.:...:......|..||.:....  .|.|:..|:|.:      
 Worm   234 GRFQLVRKRGRSEVWNLFGQVLDSLTQVRLPFVACYACKVLYTDTGGGTGNMTRHRCPIGASYRS 298

  Fly    83 -DYLRTEELCEEGIAEIHPPKLDDSLERRL----------------------------SWNSFQP 118
             .:..:.|..|.|...    ..|.::..|:                            |.||..|
 Worm   299 STHASSTETVEAGGTN----SFDSAISARIMSSADVTRSQLSISMVESGSGSGPSGSGSGNSSLP 359

  Fly   119 -----SEWSFHAV------ELLLELWARHC-VDLRD----SRKRVQVIWKMTGEMKSLG------ 161
                 |...|...      |:|.:...:.| :||.|    |.|..:.:.|....:...|      
 Worm   360 LLTQHSGEEFQNTIGDVDREVLTDAIVKCCALDLIDPMVFSGKGFRSLLKQICHVSKRGGVSPPI 424

  Fly   162 ------------------FTFTEIKNKIDDMGQQYRRESHMEKTTG------HKSQ----WEYFE 198
                              |...::||::....|..|........:|      |.|:    |::..
 Worm   425 DAFPDIQTVRSAMQTHLRFCADDLKNELSRTTQGCRLALETLTYSGRDYRVIHGSRISPDWKWRS 489

  Fly   199 TMKMIFSSDRN---------IIDNMPLDKSG---SAPNTTSE-------------------HNSF 232
            .:..:|.:..|         ::.|..|:::.   :.||:.::                   ..:|
 Worm   490 NILGVFKAKENESLNEMINLVVHNYELNRTFLRITIPNSNNDLEGNVKCFFDIKAKLKEILFTTF 554

  Fly   233 GS-------------QLDEPLIDRNYLRSQKVHPGEGDSFDMNEYADEAQEDVDELRIL-----K 279
            .:             ||.:.|::.:........|.| |.||::....|..:...:|..:     .
 Worm   555 SACSQPVMDMLNAVDQLTKALVEMDVRLPFATEPRE-DIFDVHNLLAEWNDQWGQLEQIISTKCA 618

  Fly   280 DNIIREIEESSTVHSQE--------------------NY----------EDELDQQNSKTEDMKI 314
            |.::...::....|.::                    |:          :.|...||.:...:..
 Worm   619 DTLLENFKKLDPTHMRDLEVFILPFRETIESLTSEHPNFHKILPEWLALQHECQVQNDEPTALLR 683

  Fly   315 AKRQRAARIMEIEEEKLVIERKK 337
            ..:|.|.:::|.|:||::.:..:
 Worm   684 ELKQIATKVLESEKEKIMTDEHR 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sspNP_648546.1 Myb_DNA-bind_4 121..198 CDD:463994 20/121 (17%)
Y105C5A.15NP_001294099.1 None

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