DRSC/TRiP Functional Genomics Resources

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Protein Alignment vers and Msantd1

DIOPT Version :10

Sequence 1:NP_648545.1 Gene:vers / 39374 FlyBaseID:FBgn0011335 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001102559.1 Gene:Msantd1 / 498394 RGDID:1565796 Length:278 Species:Rattus norvegicus


Alignment Length:305 Identity:59/305 - (19%)
Similarity:105/305 - (34%) Gaps:98/305 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PRMKSSLQALLSDEGSPTGPQRTAKINVAQKMVVEPAIRANGISPLPKNVGKEEKFEDYYTKTER 151
            |.::..|.|||    :|.|....|...|...:|          ||                :||:
  Rat     5 PGLRPCLSALL----NPAGASSMAAAEVPGYLV----------SP----------------QTEK 39

  Fly   152 H----VWKKDAE-KMLLQLWAQHLKDFRGESKNVIIYRQMAREMSQFGPSH---TELKTKMDNLS 208
            |    .| .||| :.|:.:|.:...:.:...:|..:|.:||.::.:.....   .|:|.|:.|::
  Rat    40 HRRARNW-TDAEMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMT 103

  Fly   209 RKYRIEAERVRETGVPSKWEHFHKLQALLIGTKSVDVFEDITAENPAQALFSDEDYEPEELSSLK 273
            .:||..........||..|.::..:..:|             |:.|       |..|    ..|.
  Rat   104 FQYRKLKCMTDSESVPPDWPYYLAIDRIL-------------AKVP-------ESCE----GKLP 144

  Fly   274 DEPMAGDDGNVFESDMVASKAMKRTRTPSPSIPEIP---------EEDEEEEEEEEDDDHMKDLS 329
            |....|...:..|:.:            |||....|         .|...|::..:....:..|.
  Rat   145 DGQQPGPSTSQTEASL------------SPSAKSTPLYLPYTQCSYEGRFEDDRSDSSSSLLSLK 197

  Fly   330 PSPISKCQTKRKASNNHSDRLLEIEEEKLAIEREKLQVMKDALLE 374
            .....:...|||..:.|             ::::||::: :|:||
  Rat   198 FRSEERPVKKRKMRSCH-------------LQKKKLRLL-EAMLE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
versNP_648545.1 Myb_DNA-bind_4 151..232 CDD:463994 20/88 (23%)
Msantd1NP_001102559.1 Myb_DNA-bind_4 44..125 CDD:463994 19/81 (23%)

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