DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6793 and LAMA5

DIOPT Version :10

Sequence 1:NP_648541.1 Gene:CG6793 / 39369 FlyBaseID:FBgn0036242 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_006723859.1 Gene:LAMA5 / 3911 HGNCID:6485 Length:3700 Species:Homo sapiens


Alignment Length:703 Identity:158/703 - (22%)
Similarity:252/703 - (35%) Gaps:257/703 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 QAAKQEQLHQQQLREEADEKLRIGGEELLRKFAGRNLCITREEECARELKQLQAEQLEAKRLAEE 101
            :.|:|.::.:||......:..|:||:.:     |     ||:          ||.||    ||..
Human  2228 ETAQQLEVLEQQSTSLGQDARRLGGQAV-----G-----TRD----------QASQL----LAGT 2268

  Fly   102 ESKAARLEHQKNRKKRIEAAQKLLEQL-----------RPGPRELQCARLQSEV------MRSVN 149
            |   |.|.|.|.....|.|..:.|.:|           ...|...|..|..:||      ||:.:
Human  2269 E---ATLGHAKTLLAAIRAVDRTLSELMSQTGHLGLANASAPSGEQLLRTLAEVERLLWEMRARD 2330

  Fly   150 V---QREVQAEFARVNQQQKELDRKIFQEQVLRGFEEAQQRHKEQCQQLSEHK------KELLHL 205
            :   |...:||.|..   |:.|.|  .|||:...:||.|....:...:|::|:      :|.|:.
Human  2331 LGAPQAAAEAELAAA---QRLLAR--VQEQLSSLWEENQALATQTRDRLAQHEAGLMDLREALNR 2390

  Fly   206 IAERERERQATKAK---ELEEALKERERNERMMKDQQAKEKELQAAKQRKKKDEALASLVMSDQR 267
            ..:..||.|...::   .|||||   :|.:.:.:|....:..|.||:      :.|||:      
Human  2391 AVDATREAQELNSRNQERLEEAL---QRKQELSRDNATLQATLHAAR------DTLASV------ 2440

  Fly   268 QKRLQMLEEMEQVRCDIHNKAKGDLEQL--KRDRAKERVDQRIRRNEKLAKELAPRLHYSAREDE 330
               .::|..::|        ||.:||:|  ..|.|:..:.||::.......:|  ||..:|    
Human  2441 ---FRLLHSLDQ--------AKEELERLAASLDGARTPLLQRMQTFSPAGSKL--RLVEAA---- 2488

  Fly   331 ERHKRQLEE-------------------------------MRKVHSAEQAKWRKSKEQAKNARLA 364
            |.|.:||.:                               ::.|.:||.|. .::.:||.:....
Human  2489 EAHAQQLGQLALNLSSIILDVNQDRLTQRAIEASNAYSRILQAVQAAEDAA-GQALQQADHTWAT 2552

  Fly   365 VQREEEGLAKKSRQ-----KAEEDRRLAEEQR-------LQNHQT---NVQFKRQQREEHIQRIR 414
            |.|  :||..:::|     .|.|:..|.|:||       ||..:|   :|:.|:.|.|.|||..:
Human  2553 VVR--QGLVDRAQQLLANSTALEEAMLQEQQRLGLVWAALQGARTQLRDVRAKKDQLEAHIQAAQ 2615

  Fly   415 -KLRQDLDEQVKK----------------RIEEETRP-GTNYNR-EAQLEELREDAFFFDYARQL 460
             .|..|.||..||                |::.:.:. ..|..| :.|.|.||..    |..:.:
Human  2616 AMLAMDTDETSKKIAHAKAVAAEAQDTATRVQSQLQAMQENVERWQGQYEGLRGQ----DLGQAV 2676

  Fly   461 MDE--------------------------------------------AQAKGCPLKPFIRAVGQY 481
            :|.                                            |||:|...|..:    ..
Human  2677 LDAGHSVSTLEKTLPQLLAKLSILENRGVHNASLALSASIGRVRELIAQARGAASKVKV----PM 2737

  Fly   482 KNDNRIGAEIRIPRHM-----ITRLPM---------GRRTQ-------GDSQAEGK---EKPSDK 522
            |.:.|.|.::|.||.:     .|.|..         |:.|:       |..||.|.   ....||
Human  2738 KFNGRSGVQLRTPRDLADLAAYTALKFYLQGPEPEPGQGTEDRFVMYMGSRQATGDYMGVSLRDK 2802

  Fly   523 Q--------EPNSEKLSKEEKLLRQ----KIDENLK------KIEALVLQEGK 557
            :        |.....||.:|.:..|    .:|..|:      .:|..::||.|
Human  2803 KVHWVYQLGEAGPAVLSIDEDIGEQFAAVSLDRTLQFGHMSVTVERQMIQETK 2855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6793NP_648541.1 PTZ00121 <33..433 CDD:173412 118/489 (24%)
LAMA5XP_006723859.1 Laminin_N 45..298 CDD:459653
EGF_Lam 299..347 CDD:238012
EGF_Lam 358..421 CDD:238012
Laminin_EGF 429..473 CDD:395007
EGF_Lam 494..541 CDD:214543
EGF_Lam 540..583 CDD:238012
Laminin_EGF 587..634 CDD:395007
Laminin_EGF 632..679 CDD:395007
EGF_Lam 676..718 CDD:238012
EGF_Lam 775..827 CDD:238012
EGF_Lam 828..>867 CDD:238012
Laminin_EGF 1438..1486 CDD:395007
Laminin_EGF 1528..1579 CDD:395007
Laminin_EGF 1577..1625 CDD:395007
Laminin_B 1693..1829 CDD:459652
EGF_Lam 1863..>1899 CDD:238012
Laminin_EGF 1913..1966 CDD:395007
EGF_Lam 1968..2021 CDD:238012
EGF_Lam 2023..2067 CDD:214543
EGF_Lam 2069..2115 CDD:238012
Laminin_EGF 2117..>2145 CDD:395007
Laminin_I 2192..2450 CDD:310534 67/279 (24%)
Smc <2347..>2619 CDD:440809 74/308 (24%)
Laminin_II 2641..2762 CDD:368703 21/128 (16%)
LamG 2781..2908 CDD:214598 17/75 (23%)
LamG 2943..3095 CDD:238058
LamG 3124..3267 CDD:238058
LamG 3345..3502 CDD:238058
LamG 3526..3676 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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