DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6793 and LAMA2

DIOPT Version :10

Sequence 1:NP_648541.1 Gene:CG6793 / 39369 FlyBaseID:FBgn0036242 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_000417.3 Gene:LAMA2 / 3908 HGNCID:6482 Length:3122 Species:Homo sapiens


Alignment Length:511 Identity:105/511 - (20%)
Similarity:202/511 - (39%) Gaps:140/511 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ARLQSEVMRSVNVQREVQAEFARVNQQQKELDRKIFQEQVLRGFEE---------AQQRHKEQCQ 193
            |||:..|| |:|:...:.|.:                 ::|.|.|.         :.||..|:..
Human  1587 ARLEQMVM-SINLTGPLPAPY-----------------KMLYGLENMTQELKHLLSPQRAPERLI 1633

  Fly   194 QLSE--------HKKELL----HLIAERER-----ERQATKAKELEEALKERER-----NERMMK 236
            ||:|        ...|||    .:.|:.|:     ||..|:||.|.|.:||..|     ||:.:|
Human  1634 QLAEGNLNTLVTEMNELLTRATKVTADGEQTGQDAERTNTRAKSLGEFIKELARDAEAVNEKAIK 1698

  Fly   237 -------DQQAKEKELQAAKQRKKKDEALASLVMSDQRQKRLQMLEEM---EQVRCD-------- 283
                   ..:|.|:.|:..  :|:.|:.:..|     |:|.|:..:|:   |.|..:        
Human  1699 LNETLGTRDEAFERNLEGL--QKEIDQMIKEL-----RRKNLETQKEIAEDELVAAEALLKKVKK 1756

  Fly   284 IHNKAKGDLEQLKRDRAKERVDQRIRRNE--KLAKELAPRLHYSAREDEERHKRQLEEMRKVHSA 346
            :..:::|:.|::::|..::..|.:.:.::  .|.:|...::            |:...:..|:..
Human  1757 LFGESRGENEEMEKDLREKLADYKNKVDDAWDLLREATDKI------------REANRLFAVNQK 1809

  Fly   347 EQAKWRKSKEQAKNARLAVQREEEGLAKKSRQKAEEDRRLAEE-QRLQNHQTNVQFKRQQREEHI 410
            ......|.||..::.:    |:.|...|:.....:|..|||:| ..:.::..::|.|.....|.:
Human  1810 NMTALEKKKEAVESGK----RQIENTLKEGNDILDEANRLADEINSIIDYVEDIQTKLPPMSEEL 1870

  Fly   411 -QRIRKLRQDL-DEQVKKRIEEETRPGTNYNREAQLEELREDAFFFDYARQLMDEAQAKGCPLKP 473
             .:|..|.|:: |.::.:::.:         .|:...:|.:.:...|   .::|||:........
Human  1871 NDKIDDLSQEIKDRKLAEKVSQ---------AESHAAQLNDSSAVLD---GILDEAKNISFNATA 1923

  Fly   474 FIRAVGQYKN----DNRIGAEIRIPRHMITRLPMGRRTQGDSQAEGKEKPSDKQEPNSEKLSKEE 534
            ..:|....|:    ..::..|.:...|..|:|..|.|......|:|..:.|.:....::||:.:.
Human  1924 AFKAYSNIKDYIDEAEKVAKEAKDLAHEATKLATGPRGLLKEDAKGCLQKSFRILNEAKKLANDV 1988

  Fly   535 K----------------------LLRQKIDENLKKIEAL------VLQEGKDKDDQ 562
            |                      ||| .:::.|.|:.|:      .||..|||..|
Human  1989 KENEDHLNGLKTRIENADARNGDLLR-TLNDTLGKLSAIPNDTAAKLQAVKDKARQ 2043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6793NP_648541.1 PTZ00121 <33..433 CDD:173412 73/348 (21%)
LAMA2NP_000417.3 LamNT 37..285 CDD:214532
EGF_Lam 287..334 CDD:238012
Laminin_EGF 414..471 CDD:395007
Laminin_EGF 469..515 CDD:395007
LamB 578..710 CDD:214597
EGF_Lam 756..805 CDD:238012
Laminin_EGF 807..862 CDD:395007
EGF_Lam 864..916 CDD:238012
EGF_Lam 917..965 CDD:238012
EGF_Lam 967..1011 CDD:214543
EGF_Lam 1014..1057 CDD:214543
Laminin_EGF 1060..1108 CDD:395007
Laminin_EGF 1106..1163 CDD:395007
LamB 1229..1364 CDD:214597
Laminin_EGF 1420..1466 CDD:395007
Laminin_EGF 1469..1524 CDD:395007
EGF_Lam 1527..1574 CDD:238012
Domain II and I 1574..2144 105/511 (21%)
Laminin_I 1593..1852 CDD:310534 63/299 (21%)
SMC_prok_B 1718..>2077 CDD:274008 67/360 (19%)
Laminin_II 2037..2173 CDD:368703 4/7 (57%)
Laminin_G_1 2174..2314 CDD:395008
Laminin_G_1 2368..2507 CDD:395008
Laminin_G_1 2554..2695 CDD:395008
Laminin_G_1 2793..2921 CDD:395008
LamG 2941..3093 CDD:238058
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3043..3063
Blue background indicates that the domain is not in the aligned region.

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