DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and AT1G10340

DIOPT Version :9

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_563867.1 Gene:AT1G10340 / 837573 AraportID:AT1G10340 Length:578 Species:Arabidopsis thaliana


Alignment Length:478 Identity:107/478 - (22%)
Similarity:169/478 - (35%) Gaps:125/478 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1381 ILCIAAHEGILPMVSLLLEFGAD-VGLTNSQGCTPLILAAMRGHCDVVRPLVAAGSSL-GQLDIT 1443
            :|.:||..|...:||.::|.... |...|:...|||.|||:.|..::|..::..|..: ...:|.
plant    40 VLHMAAKFGHRELVSKIIELRPSLVSSRNAYRNTPLHLAAILGDVNIVMQMLETGLEVCSARNIN 104

  Fly  1444 QRCALVHAARMGHLSVVKYLLACDWSPRPHSQDVTRSVALQQALIGAAAQAHC---KILEDLLDL 1505
            ....|..|.|...:...: |:|          :.|:|:.|.:.::..::.:..   .|||...||
plant   105 NHTPLHLACRSNSIEAAR-LIA----------EKTQSIGLGELILAISSGSTSIVGTILERFPDL 158

  Fly  1506 NETEFDLDVNGMEPSSGELALTAAARHGCIDVVGIL--LSRGAQIDARNRQGYSALWLAVKEGHW 1568
            ...|..:    :|..|....|..|...|..::..||  |.:|.: :|.|..|.|.|.|||..|..
plant   159 AREEAWV----VEDGSQSTLLHHACDKGDFELTTILLGLDQGLE-EALNPNGLSPLHLAVLRGSV 218

  Fly  1569 SVVEHLLQRGALLDEPLGQTRKTPLMIAAEEGHLELVDLLLARGAQREAQDHEGFTALSWACLRG 1633
            .::|..|.             |.||..::.....|.|..|.||....:|                
plant   219 VILEEFLD-------------KVPLSFSSITPSKETVFHLAARNKNMDA---------------- 254

  Fly  1634 HLAAAKTLIEHGCNR----HHEDHNGRTALDLAAYQGAASLVIYILEQGGNLEHIDVHGMRPLDR 1694
            .:..|::|   |.|.    ...|.:|.|.|.:||                     .|....||.|
plant   255 FVFMAESL---GINSQILLQQTDESGNTVLHIAA---------------------SVSFDAPLIR 295

  Fly  1695 AIACRNIQAVQVFLRKGAKLGPTTWSMAMGKPEILVILLNKLLEDGNVLYRKNRF-----QEAAH 1754
            .|..:||    |.:....|:|...:.           ||.:..:|..:|.|..||     ||.  
plant   296 YIVGKNI----VDITSKN
KMGFEAFQ-----------LLPREAQDFELLSRWLRFGTETSQEL-- 343

  Fly  1755 RYQYALRKISGLEQLLERNAIFAQLRTNLLLNLSRCKRKLNELDASIDLATQAIAQKPHSYEGYY 1819
                      ..|..:|::....::....||.:             |.:.|..||::..|.|...
plant   344 ----------DSENNVEQHEGSQEVEVIRLLRI-------------IGINTSEIAERKRSKEQEV 385

  Fly  1820 ARAKARMELGALNEALVDANEAM 1842
            .|.:..:|.....|||.:|...:
plant   386 ERGRQNLEYQMHIEALQNARNTI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:291308
Ank_5 1363..1418 CDD:290568 12/37 (32%)
ANK 1378..1503 CDD:238125 30/126 (24%)
ANK repeat 1382..1408 CDD:293786 8/26 (31%)
ANK repeat 1410..1441 CDD:293786 9/31 (29%)
Ank_2 1415..1552 CDD:289560 32/142 (23%)
ANK 1486..1609 CDD:238125 31/127 (24%)
ANK repeat 1486..1518 CDD:293786 6/34 (18%)
ANK repeat 1521..1552 CDD:293786 9/32 (28%)
Ank_2 1526..1619 CDD:289560 27/94 (29%)
ANK 1549..1675 CDD:238125 30/129 (23%)
ANK repeat 1554..1586 CDD:293786 9/31 (29%)
ANK repeat 1591..1619 CDD:293786 8/27 (30%)
Ank_2 1593..1685 CDD:289560 17/95 (18%)
ANK repeat 1621..1652 CDD:293786 4/34 (12%)
ANK repeat 1654..1685 CDD:293786 5/30 (17%)
Ank_2 1659..1735 CDD:289560 15/75 (20%)
ANK repeat 1687..1712 CDD:293786 7/24 (29%)
TPR_11 1736..1812 CDD:290150 15/80 (19%)
TPR repeat 1736..1768 CDD:276809 7/36 (19%)
TPR repeat 1773..1810 CDD:276809 5/36 (14%)
TPR_11 1783..1843 CDD:290150 14/60 (23%)
TPR repeat 1815..1843 CDD:276809 7/28 (25%)
AT1G10340NP_563867.1 ANK 38..152 CDD:238125 27/122 (22%)
ANK repeat 38..68 CDD:293786 8/27 (30%)
Ank_2 41..131 CDD:289560 25/100 (25%)
ANK repeat 70..102 CDD:293786 9/31 (29%)
Ank_2 136..227 CDD:289560 26/108 (24%)
ANK repeat 170..202 CDD:293786 9/32 (28%)
ANK 173..285 CDD:238125 35/144 (24%)
Ank_2 209..309 CDD:289560 34/156 (22%)
ANK repeat 238..274 CDD:293786 10/54 (19%)
PGG 399..509 CDD:290670 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1009
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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