DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and AT5G54710

DIOPT Version :9

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_001332664.1 Gene:AT5G54710 / 835560 AraportID:AT5G54710 Length:643 Species:Arabidopsis thaliana


Alignment Length:390 Identity:91/390 - (23%)
Similarity:151/390 - (38%) Gaps:90/390 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1373 TDYMGGAPILCIAAHEGILPMVSLLLEFG-ADVGLTNSQGCTPLILAAMRGHCDVVRPLVAAGSS 1436
            |:..|..| |.:||..|...::..:|..| ||....|.||.|..|||.:..|.|....||....|
plant    14 TNVDGNTP-LHLAAEIGNESILWKMLRCGRADCMKINKQGQTAFILACLNNHLDAALTLVENMRS 77

  Fly  1437 LGQLDITQRCALVHAARMGHLSVV--KYL-----LACDWSPRPHSQDVTRSVALQQALIGAAAQA 1494
            :..:::       .||..|...|:  |.|     |..|       .|..:|..|.:|:.....:.
plant    78 MTMVEL-------DAAFTGQQPVIIDKMLEKFPSLVLD-------VDEEQSTLLHKAVTQRNEEY 128

  Fly  1495 HCKILE---DLLDLNETEFDLDVNGMEPSSGELALTAAARHGCIDVVGILLSRG-AQIDARNRQG 1555
            ..|:::   .|:.:.      :|:|..|      |..||..|.|:::..:|..| |:....|:||
plant   129 ATKVIDLCPSLVSVT------NVDGNTP------LHLAAEIGNINILWKMLETGEAECMKINKQG 181

  Fly  1556 YSALWLAVKEGHWSVVEHLLQRGALLDEPLGQTRKTPLMIAAEEGHLELVDLLLARGAQREAQ-D 1619
            .:|..||       .:.:.:....:|.|.........|..|..|....::|.:|.:....... |
plant   182 QTAFILA-------CLNNNVNSARILVEGTSSMTMVELNAAFSEQQQVIIDSILEKFPNLILDAD 239

  Fly  1620 HEGFTALSWACLRGHLAAAKTLIEHGCNRHHEDHNGRTALDLAAYQGAASLVIYILEQGGNLEHI 1684
            .|..|.|..||..|:|..|:||::...|:           ::|                   |.:
plant   240 EEQSTLLHKACKSGNLEMARTLLDVDVNQ-----------EIA-------------------EKV 274

  Fly  1685 DVHGMRPLDRAIACRNIQAVQVFLRKGAKLGPTTWSM-AMGKPEILVILLNKLLEDGNVLYRKNR 1748
            |..|:.||.||:...:::.::.||.|    .|::::: ..|..|.:..|..|        |:|.:
plant   275 DKDGLTPLHRAVINGSVEILKEFLCK----APSSFNITTQGTIETVFHLAAK--------YQKTK 327

  Fly  1749  1748
            plant   328  327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:291308
Ank_5 1363..1418 CDD:290568 16/45 (36%)
ANK 1378..1503 CDD:238125 34/135 (25%)
ANK repeat 1382..1408 CDD:293786 8/26 (31%)
ANK repeat 1410..1441 CDD:293786 11/30 (37%)
Ank_2 1415..1552 CDD:289560 33/147 (22%)
ANK 1486..1609 CDD:238125 26/126 (21%)
ANK repeat 1486..1518 CDD:293786 5/34 (15%)
ANK repeat 1521..1552 CDD:293786 8/31 (26%)
Ank_2 1526..1619 CDD:289560 21/94 (22%)
ANK 1549..1675 CDD:238125 26/126 (21%)
ANK repeat 1554..1586 CDD:293786 7/31 (23%)
ANK repeat 1591..1619 CDD:293786 5/28 (18%)
Ank_2 1593..1685 CDD:289560 19/92 (21%)
ANK repeat 1621..1652 CDD:293786 11/30 (37%)
ANK repeat 1654..1685 CDD:293786 2/30 (7%)
Ank_2 1659..1735 CDD:289560 15/76 (20%)
ANK repeat 1687..1712 CDD:293786 8/24 (33%)
TPR_11 1736..1812 CDD:290150 2/13 (15%)
TPR repeat 1736..1768 CDD:276809 2/13 (15%)
TPR repeat 1773..1810 CDD:276809
TPR_11 1783..1843 CDD:290150
TPR repeat 1815..1843 CDD:276809
AT5G54710NP_001332664.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1009
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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