DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and AT3G09550

DIOPT Version :9

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_001325606.1 Gene:AT3G09550 / 820112 AraportID:AT3G09550 Length:614 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:291308
Ank_5 1363..1418 CDD:290568
ANK 1378..1503 CDD:238125
ANK repeat 1382..1408 CDD:293786
ANK repeat 1410..1441 CDD:293786
Ank_2 1415..1552 CDD:289560
ANK 1486..1609 CDD:238125
ANK repeat 1486..1518 CDD:293786
ANK repeat 1521..1552 CDD:293786
Ank_2 1526..1619 CDD:289560
ANK 1549..1675 CDD:238125
ANK repeat 1554..1586 CDD:293786
ANK repeat 1591..1619 CDD:293786
Ank_2 1593..1685 CDD:289560
ANK repeat 1621..1652 CDD:293786
ANK repeat 1654..1685 CDD:293786
Ank_2 1659..1735 CDD:289560
ANK repeat 1687..1712 CDD:293786
TPR_11 1736..1812 CDD:290150
TPR repeat 1736..1768 CDD:276809
TPR repeat 1773..1810 CDD:276809
TPR_11 1783..1843 CDD:290150
TPR repeat 1815..1843 CDD:276809
AT3G09550NP_001325606.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1009
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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