DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and Ankrd50

DIOPT Version :9

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_001178535.1 Gene:Ankrd50 / 294988 RGDID:1311665 Length:1427 Species:Rattus norvegicus


Alignment Length:1105 Identity:307/1105 - (27%)
Similarity:488/1105 - (44%) Gaps:179/1105 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   867 RQWLVQQLSNILLGTETRV----------------------------VLINGQPGTGKTAFCLQL 903
            |:|:..:|.:.|....:|.                            ||:.|.||:||||.|.:|
  Rat    26 REWVFHKLQHCLQEKSSRCFSAANAQSLVGDAGNNASALSGKGASWGVLLVGGPGSGKTALCTEL 90

  Fly   904 VEYSCFGRRQMQDDPDGIYSQLQLGAHCERMRGLASHMVGYHFCQADANLTCQVPDFVHSLAAQL 968
            :         ....|    :.||        |||....:.:|||:|..:.|..|..|:..|.||:
  Rat    91 L---------WPSSP----ASLQ--------RGLHRQALAFHFCKAQDSDTLCVGGFIRGLVAQI 134

  Fly   969 CQAPQLTAYRDYLLSEPHLQDILSVRECIADAERVMKLAILEPLAHLHRAGKIPAKVAVIVVDAL 1033
            ||:..|..|.| .|.:|.:|.:|...||..:.....|..:|.||..:    |.|.:...::||::
  Rat   135 CQSGLLQGYED-KLRDPAVQSLLEPGECERNPAEAFKRCVLLPLLGM----KPPPQSLYLLVDSV 194

  Fly  1034 ---C---EAEYHRPDHGHTIASFLAQLTPHFPAWLKLVATVRTQMLELVKA-PSYTQLTLDSWAS 1091
               |   |.|...|:...|:|..||.....||.||.|:.:.|.|...:.|. ..:.:::||....
  Rat   195 DEGCNVVEGEQTSPNLSGTVAELLAGHHEFFPPWLLLLCSARKQSRAVTKMFTGFRKISLDDLRK 259

  Fly  1092 SQALQQDMLDYIGARLADSPEIRMNIGGGGGQNSQSGSQPQTKFVSHLQSLSRGSMLYAKLILDL 1156
            :. :.:|:..||..||.....:|.::           ::...:.::.|...|.|..||.:.:||.
  Rat   260 AY-IVKDVQQYILHRLDQEEALRQHL-----------TKETAETLNQLHIKSSGCFLYLERVLDG 312

  Fly  1157 IARGQLVIKSSSYKVLPVSLAQIFLLHFNLRFPTARSFEQAAPILNICLAALYPLTLDEIYYSME 1221
            :....::::  ..:.:|.:|..::|......| ..:.|.:..||||:.|||..|||:.|:|:   
  Rat   313 VVENFIMLR--EIRDIPGTLNGLYLWLCQRLF-VRKQFAKVQPILNVILAACRPLTMTELYH--- 371

  Fly  1222 ALSHGREALSWPDFMQRFKLLDGFLIKRLDNTYMFFHSSLREWLMRRDEGE-SNKFLCDARLGHA 1285
            |:.....:|:..||.::..:|...|:..|.:|.:.||.|..|||:  |... :.|:||:|..||.
  Rat   372 AVWTKNMSLTLEDFQRKLDVLSKLLVDGLGSTKILFHHSFAEWLL--DVKHCTQKYLCNAAEGHR 434

  Fly  1286 GIAFRLSRLQAPLSPQLTLELGHHMLKAHL------------YGGT----SLTLLSPRD---LQS 1331
            .:|...:.....|:|....|...|::.::|            :.||    ||:.|.|::   ||.
  Rat   435 MLAMSYTCQARNLTPLEAQEFALHLINSNLQLEPAELALWMIWNGTPVKDSLSTLIPKEQEVLQL 499

  Fly  1332 YWLAGA----ADNISSSLGALRNVYSPNLKVSRLVLLAGASPNHRTDYMGGAPILCIAAHEGILP 1392
            ...|||    .|:.:|.:  :|........: |.:|.:|||.|....  .|..:|..||:.|.|.
  Rat   500 LIRAGAHVNSEDDRTSCI--VRQALEREDSI-RTLLDSGASVNQCDS--NGRTLLANAAYSGSLD 559

  Fly  1393 MVSLLLEFGADVGLTNSQGCTPLILAAMRGHCDVVRPLVAAGSSLGQLDITQRCALVHAARMGHL 1457
            :|:||:..|||:.:.::.|.|||.|||.:||..||..|:..|:::...|.....||..||..||.
  Rat   560 VVNLLVSRGADLEIEDTHGHTPLTLAARQGHTKVVNCLIGCGANINHTDQDGWTALRSAAWGGHT 624

  Fly  1458 SVVKYLL------------------ACDWSPR--------PHSQDVTRS-VALQQALIGAAAQAH 1495
            .||..||                  |..|...        .|..:|.:: ...:.|||.||...|
  Rat   625 EVVSALLYAGVKVDCADADSRTALRAAAWGGHEDIVLNLLQHGAEVNKADNEGRTALIAAAYMGH 689

  Fly  1496 CKILEDLLDLNETEFDLDVNGMEPSSGELALTAAARHGCIDVVGILLSRGAQIDARNRQGYSALW 1560
            .:|:|.|||........||:|....| ..||...|..|...||.:|:.|||::|..::.|.:.|.
  Rat   690 REIVEHLLDHGAEVNHEDVDGRTALS-VAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLL 753

  Fly  1561 LAVKEGHWSVVEHLLQRGALLDEPLGQTRKTPLMIAAEEGHLELVDLLLARGAQREAQDHEGFTA 1625
            :|..|||..||:.||:.||.:|. .....:|||:.||..||..:|:.||..||..::.|.||.|.
  Rat   754 VAAYEGHVDVVDLLLEGGADVDH-TDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTV 817

  Fly  1626 LSWACLRGHLAAAKTLIEHGCNRHHEDHNGRTALDLAAYQGAASLVIYILEQGGNLEHIDVHGMR 1690
            ||.|..:|::...:||::.|.:..|.|..|.|.|.:||::|...:...::|||.....||..|..
  Rat   818 LSIASAQGNVEVVRTLLDRGLDESHRDDAGWTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRI 882

  Fly  1691 PLDRAIACRNIQAVQVFLRKGAKLGPTTWSMAMGKPEILVILLNKLLEDGNVLYRKN---RFQEA 1752
            |...|....:...||:.|...:.:....:.   |:..:.|..|....:...:|:...   .:::|
  Rat   883 PFILASQEGHYDCVQILLENKSNIDQRGYD---GRNALRVAALEGHRDIVELLFSHGADVNYKDA 944

  Fly  1753 AHR---YQYAL-RKISGLEQLLERNAIF----AQLRTNLLLN-----------LSRCKRKLNELD 1798
            ..|   |..|| .:::..|..||..|..    |:.||.|.::           |..|...:|..|
  Rat   945 DGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHVEMVRVLIACHADVNAAD 1009

  Fly  1799 ASIDLATQAIAQKPHSYEGYYARAKARMELGALNEALVD--ANE---AMQQAAQSGVLCEVVEVL 1858
            .....|.|:.|     ::|:....:..:|.|    |:||  .|:   |:..|||.|.: :||:||
  Rat  1010 NEKRSALQSAA-----WQGHVKVVQLLIEHG----AVVDHTCNQGATALCIAAQEGHV-DVVQVL 1064

  Fly  1859  1858
              Rat  1065  1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:291308
Ank_5 1363..1418 CDD:290568 21/54 (39%)
ANK 1378..1503 CDD:238125 48/151 (32%)
ANK repeat 1382..1408 CDD:293786 11/25 (44%)
ANK repeat 1410..1441 CDD:293786 13/30 (43%)
Ank_2 1415..1552 CDD:289560 51/163 (31%)
ANK 1486..1609 CDD:238125 47/122 (39%)
ANK repeat 1486..1518 CDD:293786 14/31 (45%)
ANK repeat 1521..1552 CDD:293786 12/30 (40%)
Ank_2 1526..1619 CDD:289560 35/92 (38%)
ANK 1549..1675 CDD:238125 45/125 (36%)
ANK repeat 1554..1586 CDD:293786 13/31 (42%)
ANK repeat 1591..1619 CDD:293786 12/27 (44%)
Ank_2 1593..1685 CDD:289560 32/91 (35%)
ANK repeat 1621..1652 CDD:293786 11/30 (37%)
ANK repeat 1654..1685 CDD:293786 9/30 (30%)
Ank_2 1659..1735 CDD:289560 18/75 (24%)
ANK repeat 1687..1712 CDD:293786 6/24 (25%)
TPR_11 1736..1812 CDD:290150 21/97 (22%)
TPR repeat 1736..1768 CDD:276809 6/38 (16%)
TPR repeat 1773..1810 CDD:276809 11/51 (22%)
TPR_11 1783..1843 CDD:290150 16/75 (21%)
TPR repeat 1815..1843 CDD:276809 8/32 (25%)
Ankrd50NP_001178535.1 AAA_16 23..195 CDD:404141 51/194 (26%)
PHA03095 480..>717 CDD:222980 74/242 (31%)
ANK repeat 544..575 CDD:293786 12/30 (40%)
ANK repeat 577..608 CDD:293786 13/30 (43%)
ANK repeat 610..641 CDD:293786 10/30 (33%)
PHA03095 625..>907 CDD:222980 89/283 (31%)
ANK repeat 643..674 CDD:293786 4/30 (13%)
ANK repeat 676..707 CDD:293786 11/30 (37%)
ANK repeat 709..745 CDD:293786 13/36 (36%)
ANK repeat 747..778 CDD:293786 13/31 (42%)
PHA02876 <763..>1102 CDD:165207 89/316 (28%)
ANK repeat 780..811 CDD:293786 12/30 (40%)
ANK repeat 813..844 CDD:293786 11/30 (37%)
ANK repeat 847..877 CDD:293786 9/29 (31%)
ANK repeat 879..910 CDD:293786 6/30 (20%)
ANK repeat 912..943 CDD:293786 4/33 (12%)
ANK repeat 945..976 CDD:293786 8/30 (27%)
ANK repeat 978..1009 CDD:293786 6/30 (20%)
ANK repeat 1011..1042 CDD:293786 9/39 (23%)
ANK repeat 1044..1075 CDD:293786 9/22 (41%)
ANK repeat 1077..1102 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1073736at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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