DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and C30F2.2

DIOPT Version :10

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_510631.2 Gene:C30F2.2 / 183053 WormBaseID:WBGene00007816 Length:203 Species:Caenorhabditis elegans


Alignment Length:221 Identity:46/221 - (20%)
Similarity:75/221 - (33%) Gaps:54/221 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 SVCPSCRISFDKGKRRKLIDTCGHERCYSCMFRNDQCPMCMNSSLKDVDGANAQGYDTGIGGSTS 389
            |.||:|...:|....|..:..|||..|..|..:...||:|...:.......|.|..|:.:  :..
 Worm     8 SRCPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCKRKNAFFGTVINYQLLDSCL--AIR 70

  Fly   390 TIVSPLGSPQPQLRSHAQRNAALARYMQQHRQESQSPDYHHRYASNGKLPRAAALSTNGNGFTTG 454
            .:::...||.|..:|..:..|.      ..::.:::|:...:..:..:..|..||.|        
 Worm    71 QLLNEPMSPVPGAKSPVRGRAT------SQKRATETPNISQQVVNATRRSRRTALET-------- 121

  Fly   455 TTQTVTVDVHHQLGGGGGGAAAAAKQLMANGISGH-------SRSSSM---------SHNIHAAA 503
                 .||...|            :::..|.||.|       .|..|:         |.:|.|..
 Worm   122 -----AVDKTQQ------------REIENNWISQHIPAPESRRRDRSLRRLSERIVGSDHIPAVC 169

  Fly   504 YSELSAAPP-----AFATPPTRRRFF 524
            |..:...||     |...|....|.|
 Worm   170 YRTIYTLPPPENFAAQGVPSAFNRMF 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:434085 12/36 (33%)
Ank_2 1382..1467 CDD:463710
ANK repeat 1382..1408 CDD:293786
ANK repeat 1410..1441 CDD:293786
ANKYR 1481..1714 CDD:440430
ANK repeat 1486..1518 CDD:293786
ANK repeat 1521..1552 CDD:293786
ANK repeat 1554..1586 CDD:293786
ANK repeat 1591..1619 CDD:293786
Spy 1608..>1847 CDD:443119
ANK repeat 1621..1652 CDD:293786
ANK repeat 1654..1685 CDD:293786
ANK repeat 1687..1712 CDD:293786
TPR repeat 1736..1768 CDD:276809
TPR repeat 1773..1810 CDD:276809
TPR repeat 1815..1843 CDD:276809
C30F2.2NP_510631.2 RING-HC_RNF222 8..55 CDD:438226 14/46 (30%)
Blue background indicates that the domain is not in the aligned region.

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