DRSC/TRiP Functional Genomics Resources

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Protein Alignment rols and T28D6.4

DIOPT Version :10

Sequence 1:NP_729778.1 Gene:rols / 39368 FlyBaseID:FBgn0041096 Length:1900 Species:Drosophila melanogaster
Sequence 2:NP_499461.1 Gene:T28D6.4 / 176566 WormBaseID:WBGene00012124 Length:991 Species:Caenorhabditis elegans


Alignment Length:1072 Identity:216/1072 - (20%)
Similarity:369/1072 - (34%) Gaps:326/1072 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   868 QWLVQQLSNILLGTETRVVLINGQPGTGKTAFCLQLVEYSCFGRRQMQDDPDGIYSQLQLGAHCE 932
            :|..|        ..:|.:.|.|:..:|||.|..:|.|                           
 Worm    28 EWFQQ--------ANSRRLEIIGKEHSGKTWFARKLSE--------------------------- 57

  Fly   933 RMRGLASHMVGYHFCQADANLTCQVPDFVHSLAAQLCQA-PQLTAYRDYLLSEPHLQDILSVREC 996
                 .|..|..|||..|...:.:.|..:.||..||.:. |.|..        |.|..:..:.:.
 Worm    58 -----VSECVASHFCSHDEPQSSEPPTVIRSLGEQLMRRFPNLVL--------PRLTTVTLLEDT 109

  Fly   997 IADAERVMKLAILEPLAHLHRAGKIPAKVAVIVVDALCEAEYHRPDHGHTIASFLAQLTPHFPAW 1061
            ::..:..::|    ||..:...    :|...:|:|::.:.|      ...:...|.::   .|.|
 Worm   110 VSALDHFLRL----PLETMPST----SKPVFLVIDSVEDEE------TQVLVEMLVEI---LPPW 157

  Fly  1062 LKLVATVR------TQMLEL-----------VKAP-----SYTQLTLDSWASSQALQQ------- 1097
            :::|.|.|      |::|||           :|.|     ...:.:..||...:.|.:       
 Worm   158 IQIVTTSRDRTNSETELLELHIDSDFDKFIRLKLPHCHVEEVREASDGSWFYVEQLARAVELGMV 222

  Fly  1098 --DMLDYIG-------------------ARLADSPEIRMN------------------------- 1116
              ||:..||                   .|||.:...|..                         
 Worm   223 PSDMVPPIGVEKMMHLVARSLPRSFADIVRLAKTSRNRPTRQQLLAVSQMLVSRDISVLEKDIRI 287

  Fly  1117 ----IGGGGGQN---------------SQSGSQPQTKFVSHLQSLSRGSM--------------- 1147
                ||....:|               .:...:..|.:..|.::..|.|.               
 Worm   288 ITSLIGTASSENPSEIFHVPDIWFQLIGEENFRCHTAWAEHYKTKRRKSAQDICELAYHLSHSTT 352

  Fly  1148 --LYAKLILDLIARGQLVIKSSSYKVLPVSLAQIFLLHFNLRFPTARSFEQAAPILNIC------ 1204
              |.|...|..:..|.||::.....:...:|         |:...||..|....::..|      
 Worm   353 NPLNAVKTLQSVGAGNLVLRCHVIDLPTTAL---------LKSAGARMEENNYDVVYACSVGDVS 408

  Fly  1205 -----LAALYPLTLDEIYYSMEALSHGREALSWPDFMQRFKLLDGFLIKRLDNTYMFFHSSLREW 1264
                 |..:.|:.:|..:..:.|.:.|...      |.|| |.|.|       .::...|...||
 Worm   409 YLDAILREMKPVPMDICFGLLTAAARGNIE------MCRF-LADHF-------PHLVASSCCGEW 459

  Fly  1265 LMRRDEGESNKFLCDARL----------------GHAG-IAFRLSRLQAPLSP-QLTLELGHHML 1311
            ...|...      |..:|                ||:. .|.|.:.....|:. ||.|:.|..:.
 Worm   460 NALRSAA------CYGQLEILHLLLEKGVDVDECGHSDRTALRAAAWSGQLAAVQLLLQTGAEVD 518

  Fly  1312 KAHLYGGTSL---TLLSPRDLQSYWLAGAAD-NISSSLGA------LRN--VYSPNLKVSRLVLL 1364
            :......|:|   ..:..:|:.|..:...|| |.....||      |.|  ....|.:.::|:| 
 Worm   519 RRDSEQRTALMAAAFMCHKDVVSVIIQYGADVNAIDKSGATALHLNLSNGSKQEENSETTKLLL- 582

  Fly  1365 AGASPNHRTDY----MGGAPILCIAAHEGILPMVSLLLEFGADVGLTNSQGCTPLILAAMRGHCD 1425
                 .|..|.    ..|...|.:||:.|. |.:.|:||....|.:.::.|.|||:|||.:|..:
 Worm   583 -----EHNADCKIEDANGRVALHLAAYHGD-PCLQLILEKHPIVDVMDNMGQTPLMLAASQGQLE 641

  Fly  1426 VVRPLV-AAGSSLGQLDITQRCALVHAARMGHLSVVKYLLACDWSPRPHSQDVTRSVALQQALIG 1489
            .|:.|. .|.:.:..:|...|.||..||..||..||::|                          
 Worm   642 AVQFLTKTAKADVDAIDNNGRTALQWAAINGHPEVVEFL-------------------------- 680

  Fly  1490 AAAQAHCKILEDLLDLNETEFDLDVNGMEPSSGELALTAAARHGCIDVVGILLSRGAQIDARNRQ 1554
                  |.:..|             .|.:.:.|.:||..|..|..:::|..|.::.. ::|::|.
 Worm   681 ------CSVGSD-------------EGHKDNDGAVALHYAVTHDHVELVKHLTNQHT-VEAKDRY 725

  Fly  1555 GYSALWLAVKEGHWSVVEHLLQRGALLDEPLGQTRKTPLMIAAEEGHLELVDLLLARGAQREAQD 1619
            |...:.:|...|:..|:|:|:....::::|..:.| |.|.:|:...|..::||:..|......:|
 Worm   726 GQHPMMIAAANGNLKVLEYLMGISDIINQPDHEGR-TALSLASMAAHTSIIDLISPRITDWSQRD 789

  Fly  1620 HEGFTALSWACLRGHLAAAKTLIEHGCNRHHEDHNGRTALDLAAYQGAASLVIYILEQGG-NLEH 1683
            |:|........|...:..|:..:.||.|....|.:|||.:.:.|.....:....:...|| |.|.
 Worm   790 HDGTPLAHTLILSNLIFVAEVYLGHGANSSDSDAHGRTCVHVVASTNDVAAAKMLKRIGGVNFEA 854

  Fly  1684 IDVHGMRPLDRAIACRNIQAVQVFL--------RKGAKLGPTTWSMA--MGKPEILVILLNKLLE 1738
            :|..|...|..|:..::: |:.|||        .:..:.|.|..|:|  :|..:    |:|.||:
 Worm   855 VDRGGRTALMTAVWAKHV-AISVFLLDSCGVDPNRTDRQGATALSIAAQIGDRD----LVNLLLK 914

  Fly  1739 DGNVLYRKNRFQEAAHRYQYALRKISGLEQLL 1770
            .|    .:...:::..|....:..|||.|.::
 Worm   915 FG----AEPEIKDSMGRTAMDVAMISGNEPIV 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rolsNP_729778.1 zf-RING_5 327..364 CDD:434085
Ank_2 1382..1467 CDD:463710 31/85 (36%)
ANK repeat 1382..1408 CDD:293786 9/25 (36%)
ANK repeat 1410..1441 CDD:293786 11/31 (35%)
ANKYR 1481..1714 CDD:440430 52/241 (22%)
ANK repeat 1486..1518 CDD:293786 3/31 (10%)
ANK repeat 1521..1552 CDD:293786 8/30 (27%)
ANK repeat 1554..1586 CDD:293786 7/31 (23%)
ANK repeat 1591..1619 CDD:293786 7/27 (26%)
Spy 1608..>1847 CDD:443119 41/174 (24%)
ANK repeat 1621..1652 CDD:293786 6/30 (20%)
ANK repeat 1654..1685 CDD:293786 8/31 (26%)
ANK repeat 1687..1712 CDD:293786 7/32 (22%)
TPR repeat 1736..1768 CDD:276809 7/31 (23%)
TPR repeat 1773..1810 CDD:276809
TPR repeat 1815..1843 CDD:276809
T28D6.4NP_499461.1 ANKYR 410..713 CDD:440430 83/374 (22%)
ANK repeat 428..454 CDD:293786 8/39 (21%)
ANK repeat 459..488 CDD:293786 4/34 (12%)
ANK repeat 490..521 CDD:293786 7/30 (23%)
ANK repeat 523..554 CDD:293786 7/30 (23%)
ANK repeat 556..592 CDD:293786 9/41 (22%)
ANK repeat 594..624 CDD:293786 10/30 (33%)
ANK repeat 626..658 CDD:293786 11/31 (35%)
ANK repeat 660..691 CDD:293786 13/75 (17%)
ANKYR 706..946 CDD:440430 59/248 (24%)
ANK repeat 725..756 CDD:293786 6/30 (20%)
ANK repeat 824..856 CDD:293786 8/31 (26%)
ANK repeat 858..890 CDD:293786 7/32 (22%)
ANK repeat 892..923 CDD:293786 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.

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