DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6928 and Slc26a5

DIOPT Version :10

Sequence 1:NP_648539.1 Gene:CG6928 / 39367 FlyBaseID:FBgn0036240 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_110467.1 Gene:Slc26a5 / 83819 RGDID:69334 Length:744 Species:Rattus norvegicus


Alignment Length:640 Identity:167/640 - (26%)
Similarity:279/640 - (43%) Gaps:139/640 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YRLLPGLKWLHGYTGQDAV-ADLIAGVTVGLTVLPQGLAYATLAGLEPQYGLYSAFVGGIIYAML 71
            |..||..|||..|..::.| .||::|::.|:..||||||:|.||.:.|.:||||:|...|:|...
  Rat    62 YMFLPITKWLPAYKFKEYVLGDLVSGISTGVLQLPQGLAFAMLAAVPPVFGLYSSFYPVIMYCFF 126

  Fly    72 GSCRQVTIGPTALLALMTSRHT------------GFGLGSGP--------AYAILLCLISGVVEL 116
            |:.|.::|||.|:::||.....            |....:|.        ..|:.:.|:||:::.
  Rat   127 GTSRHISIGPFAVISLMIGGVAVRLVPDDIVIPGGVNATNGTEARDALRVKVAMSVTLLSGIIQF 191

  Fly   117 GMAVLKLGALVDLISLPVTVGFTSATAVIIGTSQLKGLLGLRGGSGSDFINTMRSVFGNLHKVRT 181
            .:.|.:.|.:...::.|:..|||:|.||.:.||.||.|.|::....|...:.:.|....|..|: 
  Rat   192 CLGVCRFGFVAIYLTEPLVRGFTTAAAVHVFTSMLKYLFGVKTKRYSGIFSVVYSTVAVLQNVK- 255

  Fly   182 GDFTLGLTSIIVLLLLRKLKDVKLDGRIRNLRTQQLVSGSI------WVIGTGRNALVVLVTSVL 240
               .|.:.|:.|.|::..|   .|.|:..|.|.::.:...|      .|:|||.:|...|     
  Rat   256 ---NLNVCSLGVGLMVFGL---LLGGKEFNERFKEKLPAPIPLEFFAVVMGTGISAGFNL----- 309

  Fly   241 AYSTCEQMESCPFILTGKVKSGL-----PNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLI 300
                   .||....:.|.:..||     |:.||  |....:|                    .:.
  Rat   310 -------HESYSVDVVGTLPLGLLPPANPDTSL--FHLVYVD--------------------AIA 345

  Fly   301 LPIIAVLGNVAISKAFG---GAGLSPTRELVALSMSNICGAFCSSMPVTGSFSRSAVNHASGVRT 362
            :.|:.....::::|...   |..:...:||:||.:.|..|:...:..::.|.|||.|...:|.:|
  Rat   346 IAIVGFSVTISMAKTLANKHGYQVDGNQELIALGICNSIGSLFQTFSISCSLSRSLVQEGTGGKT 410

  Fly   363 PLGGCYTS---VLVLLALGLLAPYFQYIPKAALSAVIISAV--IFMIEFEVIKPLWRCSRRELLP 422
            .|.||..|   :||:||.|.|   |:.:|:|.|||::|..:  :|| :|..:...||.|:.||..
  Rat   411 QLAGCLASLMILLVILATGFL---FESLPQAVLSAIVIVNLKGMFM-QFSDLPFFWRTSKIELTI 471

  Fly   423 GAITFVMSLAVGVEIGLLLGVSTDVAFLVYRAARPVLSV-SKLQTTN---------------GIN 471
            ...|||.||.:|::.||:..|...:..::||...|..:| .:|..|:               ||.
  Rat   472 WLTTFVSSLFLGLDYGLITAVIIALLTVIYRTQSPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIK 536

  Fly   472 YILIRPKHSSLYFPAVEWVRSGISKALTIHGTAPVVLDCAHVHEFDFTAARGMGSLQKELAK--- 533
            ...|   ::.:|:...:...|.:.:..   |..|.::               ||:.:|.:.|   
  Rat   537 IFQI---NAPIYYANSDLYSSALKRKT---GVNPAII---------------MGARRKAMRKYAK 580

  Fly   534 -------ANAPLFLMSAD---KTIGVILKESTNIDFPTI----DCPDDLEFLLEQ 574
                   |||.:..:.|:   :......:|...:.||.|    ..|::|:..|.|
  Rat   581 EVGNANIANATVVKVDAEVDGENATKPEEEDDEVKFPPIVIKTTFPEELQRFLPQ 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6928NP_648539.1 SUL1 19..540 CDD:440424 152/586 (26%)
Slc26a5NP_110467.1 PRK11660 66..709 CDD:481320 165/636 (26%)
Involved in motor function. /evidence=ECO:0000250|UniProtKB:Q9JKQ2 158..168 1/9 (11%)
Extended region for STAS domain. /evidence=ECO:0000269|PubMed:20471983, ECO:0007744|PDB:3LLO 505..718 27/152 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..744
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.