DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6928 and Prestin

DIOPT Version :9

Sequence 1:NP_648539.1 Gene:CG6928 / 39367 FlyBaseID:FBgn0036240 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster


Alignment Length:711 Identity:164/711 - (23%)
Similarity:277/711 - (38%) Gaps:197/711 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RKWGY-----RLLPGLKWLHGYT-GQDAVADLIAGVTVGLTVLPQGLAYATLAGLEPQYGLYSAF 62
            |.|.:     .::|.|:||..|: .:|...|:|||.||.:..:|.|:||..|||:....|||.|.
  Fly    69 RSWNFFALFTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAV 133

  Fly    63 VGGIIYAMLGSCRQVTIGPTALLALMTSR-----------H-----TGFGLGS-GPAYAILLCLI 110
            ...:.|..||:.:.::||..|:.::||::           |     ..|||.| |.|.|..|.||
  Fly   134 FPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLI 198

  Fly   111 S-----------------------------------------GVVELGMAVLKLGALVDLISLPV 134
            :                                         |:|.|.||.|:||.|..|:|.|:
  Fly   199 NSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPL 263

  Fly   135 TVGFTSATAVIIGTSQLKGLLGL---RGGSGSDFINTMRSVFGNLHKVRTGDFTLGLTSIIVLLL 196
            ..|||:|.|..:.|:|||.:||:   |.......|.|:..|...:.:....:|...:..|..:::
  Fly   264 VNGFTTAAACHVVTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVIAFMMI 328

  Fly   197 LRKLKDVKLDGRIRNLRTQQLVSGSIWVIGTGRNALVVLVTS----VLAYSTCEQMESCPFILTG 257
            ..::...:|..:.|.....:|    |.|||.      .|::.    .:.|:...         .|
  Fly   329 CNEILKPRLSKKCRFPLPAEL----IMVIGG------TLISKWFNLYVDYNVNP---------VG 374

  Fly   258 KVKSGLPNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLILPIIAVLGNVAISKAFG----- 317
            |:.||||...||:.                     :|.|.:.:..|...:...:|..:.|     
  Fly   375 KIPSGLPEPVLPRL---------------------DLVPKVAVDSIAIAIVTYSIIMSMGLTFAK 418

  Fly   318 --GAGLSPTRELVALSMSNICGAFCSSMPVTGSFSRSAVNHASGVRTPLGGCYTSVLVLLALGLL 380
              |..:.|.:||.|:.:.|:.|...|.:|:..|.|||.:...:|..:.:....::.||::.|..:
  Fly   419 KHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWI 483

  Fly   381 APYFQYIPKAALSAVIISAV--IFMIEFEVIKPLWRCSRRELLPGAITFVMSLAVGVEIGLLLGV 443
            .|:|..:|:..|:.|||.|:  :|| :.:.:|...:..:.|:.....||:..:.:.::||||:|:
  Fly   484 GPFFSSLPRCVLAGVIIVALKPMFM-QAKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGI 547

  Fly   444 STDVAFLVYRAARP--------------------------VLSVSKLQTTNGINYILIRPKHSSL 482
            ...:..|..:..:|                          |..|...:.:..:|:.      :||
  Fly   548 CISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFA------TSL 606

  Fly   483 YF-----PAVEWVRSGISKALTIHGTAP--------------------------------VVLDC 510
            :|     .||...:..::|..:.:..:|                                :|||.
  Fly   607 FFRRALYEAVGLDKIPLTKVSSSNSNSPSKGSKSSYSPVSQNGGKAINGKLEETSGAFKVLVLDF 671

  Fly   511 AHVHEFDFTAARGMGSLQKELAKANAPLFLMS-ADKTIGVI-----LKESTNIDFPTI-DC 564
            :.:...|....|.:..|.|||....|.|.|.| .|:....:     |.|.....|||: ||
  Fly   672 SMLGHIDVAGCRTLTDLSKELKVRGARLLLASPVDRVYDTLVHSMALSEGPFEIFPTLHDC 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6928NP_648539.1 sulP 12..531 CDD:273284 148/656 (23%)
STAS_SulP_like_sulfate_transporter 471..>540 CDD:132913 19/105 (18%)
PrestinNP_649024.1 sulP 82..731 CDD:273284 160/695 (23%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 29/153 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439038
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100144
Panther 1 1.100 - - P PTHR11814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
76.740

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