DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pop2 and AT1G15920

DIOPT Version :9

Sequence 1:	NP_001287041.1	Gene:	Pop2 / 39366	FlyBaseID:	FBgn0036239	Length:	361	Species:	Drosophila melanogaster
Sequence 2:	NP_173044.1	Gene:	AT1G15920 / 838162	AraportID:	AT1G15920	Length:	286	Species:	Arabidopsis thaliana

Alignment Length:	261	Identity:	125/261 - (47%)
Similarity:	171/261 - (65%)	Gaps:	16/261 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 ISGAPHAHIPSNEE--CGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPV------G 65
            :|.||:   |..|:  ..||:||..|||:|...|.:.:..:.||||||||||:|.:.|      .
plant     1 MSQAPN---PEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPN 62

  Fly    66 EFRSTADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPP----GYSTWQFNFK-FNLSEDMYAQDS 125
            .:....:|:|..|:.||::|::||||||..|:.|..|.    ....|||||: ||:..||:|.||
plant    63 PYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDS 127

  Fly   126 IDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTDQNLPPD 190
            |:||:.|.|..:|:.|.|:|...||||||.||:||.:.|.|:.||.|||||||||||:.:.||.:
plant   128 IELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEE 192

  Fly   191 ESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMR 255
            .|:|||.:..:||.::||||||..|.||.|||:::|:.|.::|||..||||||:|||...|.||:
plant   193 ISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLRTFIKMK 257

  Fly   256 E 256
            |
plant   258 E 258

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pop2	NP_001287041.1	CAF1	25..257	CDD:304961	120/243 (49%)
AT1G15920	NP_173044.1	CAF1	16..265	CDD:420020	120/243 (49%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	136	1.000	Domainoid score	I1592
eggNOG	1	0.900	-	-		E1_COG5228
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	284	1.000	Inparanoid score	I858
OMA	1	1.010	-	-		QHG54002
OrthoDB	1	1.010	-	-		D931256at2759
OrthoFinder	1	1.000	-	-		FOG0001271
OrthoInspector	1	1.000	-	-		otm2490
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10797
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X785
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.940