DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pop2 and cnot7

DIOPT Version :9

Sequence 1:NP_001287041.1 Gene:Pop2 / 39366 FlyBaseID:FBgn0036239 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_021336741.1 Gene:cnot7 / 768119 ZFINID:ZDB-GENE-061013-29 Length:295 Species:Danio rerio


Alignment Length:326 Identity:187/326 - (57%)
Similarity:231/326 - (70%) Gaps:52/326 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQL 77
            |.|.:..::.  |.:||..|||||.:.||:|.:|::|:|||||||||||||:|||||.|||.|||
Zfish     2 PAATVDHSQR--ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQL 64

  Fly    78 LRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGIQFKKHEED 142
            ||||||||:|||||||||::.|:.|||.|||||||||||:|||||||||:||.:||||||||||:
Zfish    65 LRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEE 129

  Fly   143 GIDPIDFAELLMSSGIVLVENIKWLCFH---------SGYDFGYLLKLLTDQNLPPDESEFFDLL 198
            ||:.:.||||||:||:||.|.:|||.||         ||||||||:|:|::..||.:|.:||::|
Zfish   130 GIETMYFAELLMTSGVVLCEGVKWLSFHRHILVFLLNSGYDFGYLIKILSNSKLPDEEVDFFEIL 194

  Fly   199 HIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREVQHTNDF 263
            .::||.|:|:||||||||||||||||||:||||.|:|||||||||:||||||||||||:      
Zfish   195 RLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREM------ 253

  Fly   264 HITPVAHDVLFRYLLEHTMNLKPTISCIHLLSRPAYNGGPAPDESAIISSG-----NGTGNTNST 323
                        :..:|..:.|   .|.||..               :.||     |||||....
Zfish   254 ------------FFEDHIDDAK---YCGHLYG---------------LGSGSSYVQNGTGNAYEE 288

  Fly   324 E 324
            |
Zfish   289 E 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pop2NP_001287041.1 CAF1 25..257 CDD:304961 171/240 (71%)
cnot7XP_021336741.1 CAF1 1..288 CDD:329090 186/323 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595755
Domainoid 1 1.000 203 1.000 Domainoid score I2918
eggNOG 1 0.900 - - E1_COG5228
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49011
Inparanoid 1 1.050 384 1.000 Inparanoid score I1996
OMA 1 1.010 - - QHG54002
OrthoDB 1 1.010 - - D365788at33208
OrthoFinder 1 1.000 - - FOG0001271
OrthoInspector 1 1.000 - - otm26565
orthoMCL 1 0.900 - - OOG6_101138
Panther 1 1.100 - - LDO PTHR10797
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R161
SonicParanoid 1 1.000 - - X785
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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