Protein Alignment Pop2 and cnot8

DIOPT Version :10

• Sequence 1: NP_001287041.1
• Gene: Pop2 / 39366
• FlyBaseID: FBgn0036239
• Length: 361
• Species: Drosophila melanogaster
• Sequence 2: NP_001016578.1
• Gene: cnot8 / 549332
• XenbaseID: XB-GENE-960216
• Length: 289
• Species: Xenopus tropicalis
• Alignment Length: 261
• Identity: 176/261 - (67%)
• Similarity: 218/261 - (83%)
• Gaps: 12/261 - (4%)

  Fly     5 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRS 69
            ||:|        :..|.:. |.:||..|||||...||::|:.|.|:||||||||||.||:|||||
 Frog     1 MPAA--------VVDNSQV-ICEVWAVNLEEEMHKIRELVRTYGYIAMDTEFPGVVVRPIGEFRS 56

  Fly    70 TADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGI 134
            |.||.|||||||||||:|||||||||::.|:.|||.:||||||||||:||||:|||||||.|||:
 Frog    57 TIDYQYQLLRCNVDLLKIIQLGLTFMNEKGEYPPGINTWQFNFKFNLTEDMYSQDSIDLLANSGL 121

  Fly   135 QFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTDQNLPPDESEFFDLLH 199
            ||:||||:|||.:.||||||:||:||.:|:|||.|||||||||::|||||..||.:|.|||.:|:
 Frog   122 QFQKHEEEGIDTLTFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILN 186

  Fly   200 IYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREV---QHTN 261
            ::||:|:|:|||||||||||||||||||||:|:|:|.|||||||:||||||||:|:|:   .|.:
 Frog   187 LFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFEDHID 251

  Fly   262 D 262
            |
 Frog   252 D 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pop2	NP_001287041.1	CAF1	25..257	CDD:474062	169/231 (73%)
cnot8	NP_001016578.1	CAF1	1..263	CDD:474062	176/261 (67%)