Protein Alignment Pop2 and cnot8

DIOPT Version :10

• Sequence 1: NP_001287041.1
• Gene: Pop2 / 39366
• FlyBaseID: FBgn0036239
• Length: 361
• Species: Drosophila melanogaster
• Sequence 2: NP_998644.1
• Gene: cnot8 / 406788
• ZFINID: ZDB-GENE-040426-2845
• Length: 285
• Species: Danio rerio
• Alignment Length: 253
• Identity: 178/253 - (70%)
• Similarity: 216/253 - (85%)
• Gaps: 9/253 - (3%)

  Fly     5 MPSAISGAPHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRS 69
            ||:|::.....         |.:||..|:|||.|.||:::|.|:|:||||||||||.||:|||||
Zfish     1 MPAALADTSQI---------ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRS 56

  Fly    70 TADYHYQLLRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLSEDMYAQDSIDLLQNSGI 134
            |.||.|||||||||||:|:|||||||::||..|||.:||||||||||:||||:|||||||||||:
Zfish    57 TVDYQYQLLRCNVDLLKIVQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGL 121

  Fly   135 QFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTDQNLPPDESEFFDLLH 199
            |||||||:|||.:.||||||:||:||.||:|||.||||||||||:|||||..||.:|.|||.:|:
Zfish   122 QFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHEFFQILN 186

  Fly   200 IYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREV 257
            ::||.|:|:|||||||||||||||||||||||:|:|.|||||||:||||||||:|:|:
Zfish   187 LFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFRMKEL 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pop2	NP_001287041.1	CAF1	25..257	CDD:474062	174/231 (75%)
cnot8	NP_998644.1	CAF1	1..264	CDD:474062	178/253 (70%)