DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pop2 and CNOT7

DIOPT Version :9

Sequence 1:NP_001287041.1 Gene:Pop2 / 39366 FlyBaseID:FBgn0036239 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_001309022.1 Gene:CNOT7 / 29883 HGNCID:14101 Length:307 Species:Homo sapiens


Alignment Length:339 Identity:190/339 - (56%)
Similarity:231/339 - (68%) Gaps:65/339 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQL 77
            |.|.:..::.  |.:||..||:||.:.||:|::||:|||||||||||||||:|||||.|||.|||
Human     2 PAATVDHSQR--ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQL 64

  Fly    78 LRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLS----------------------EDM 120
            ||||||||:|||||||||::.|:.|||.|||||||||||:                      |||
Human    65 LRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTLGVVAHACNPSTLGGRGGRITREDM 129

  Fly   121 YAQDSIDLLQNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTDQ 185
            ||||||:||..||||||||||:||:...||||||:||:||.|.:|||.||||||||||:|:||:.
Human   130 YAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNS 194

  Fly   186 NLPPDESEFFDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMA 250
            |||.:|.:||::|.::||.|:|:||||||||||||||||||:||||.|:|||||||||:||||||
Human   195 NLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMA 259

  Fly   251 FFKMREVQHTNDFHITPVAHDVLFRYLLEHTMNLKPTISCIHLLSRPAYNGGPAPDESAIISSG- 314
            ||||||:                  :..:|..:.|   .|.||..               :.|| 
Human   260 FFKMREM------------------FFEDHIDDAK---YCGHLYG---------------LGSGS 288

  Fly   315 ----NGTGNTNSTE 324
                |||||....|
Human   289 SYVQNGTGNAYEEE 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pop2NP_001287041.1 CAF1 25..257 CDD:304961 174/253 (69%)
CNOT7NP_001309022.1 CAF1 1..301 CDD:304961 189/336 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159563
Domainoid 1 1.000 195 1.000 Domainoid score I3148
eggNOG 1 0.900 - - E1_COG5228
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49011
Inparanoid 1 1.050 376 1.000 Inparanoid score I2095
Isobase 1 0.950 - 0 Normalized mean entropy S870
OMA 1 1.010 - - QHG54002
OrthoDB 1 1.010 - - D365788at33208
OrthoFinder 1 1.000 - - FOG0001271
OrthoInspector 1 1.000 - - otm40815
orthoMCL 1 0.900 - - OOG6_101138
Panther 1 1.100 - - LDO PTHR10797
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R161
SonicParanoid 1 1.000 - - X785
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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