Protein Alignment Pop2 and Cnot7

DIOPT Version :10

• Sequence 1: NP_001287041.1
• Gene: Pop2 / 39366
• FlyBaseID: FBgn0036239
• Length: 361
• Species: Drosophila melanogaster
• Sequence 2: NP_001348868.1
• Gene: Cnot7 / 18983
• MGIID: 1298230
• Length: 298
• Species: Mus musculus
• Alignment Length: 330
• Identity: 190/330 - (57%)
• Similarity: 231/330 - (70%)
• Gaps: 56/330 - (16%)

  Fly    13 PHAHIPSNEECGIRDVWKQNLEEEFRTIRKVVQKYHYVAMDTEFPGVVARPVGEFRSTADYHYQL 77
            |.|.:..::.  |.:||..||:||.:.||:|::||:|||||||||||||||:|||||.|||.|||
Mouse     2 PAATVDHSQR--ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQL 64

  Fly    78 LRCNVDLLRIIQLGLTFMDDDGKTPPGYSTWQFNFKFNLS-------------EDMYAQDSIDLL 129
            ||||||||:|||||||||::.|:.|||.|||||||||||:             |||||||||:||
Mouse    65 LRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTSGTALGPGNPYFWEDMYAQDSIELL 129

  Fly   130 QNSGIQFKKHEEDGIDPIDFAELLMSSGIVLVENIKWLCFHSGYDFGYLLKLLTDQNLPPDESEF 194
            ..||||||||||:||:...||||||:||:||.|.:|||.||||||||||:|:||:.|||.:|.:|
Mouse   130 TTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDF 194

  Fly   195 FDLLHIYFPNIFDIKYLMKSCKNLKGGLQEVADQLELRRVGPQHQAGSDALLTGMAFFKMREVQH 259
            |::|.::||.|:|:||||||||||||||||||:||||.|:|||||||||:||||||||||||:
Mouse   195 FEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREM-- 257

  Fly   260 TNDFHITPVAHDVLFRYLLEHTMNLKPTISCIHLLSRPAYNGGPAPDESAIISSG-----NGTGN 319
                            :..:|..:.|   .|.||..               :.||     |||||
Mouse   258 ----------------FFEDHIDDAK---YCGHLYG---------------LGSGSSYVQNGTGN 288

  Fly   320 TNSTE 324
            ....|
Mouse   289 AYEEE 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pop2	NP_001287041.1	CAF1	25..257	CDD:474062	174/244 (71%)
Cnot7	NP_001348868.1	CAF1	1..292	CDD:474062	189/327 (58%)