Protein Alignment viaf and Pdcl3

DIOPT Version :10

• Sequence 1: NP_524032.2
• Gene: viaf / 39364
• FlyBaseID: FBgn0036237
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_081126.2
• Gene: Pdcl3 / 68833
• MGIID: 1916083
• Length: 240
• Species: Mus musculus
• Alignment Length: 238
• Identity: 117/238 - (49%)
• Similarity: 168/238 - (70%)
• Gaps: 19/238 - (7%)

  Fly     1 MQDPNEDTEWNDVLRAKGIIGPKAKEAEITEDQIQK---LMDDAIQRRTDLPLNEGQRDKKIDDM 62
            |||||.||||||:||.|||:.||....|:.|::.:|   |:..::.             |..:||
Mouse     1 MQDPNADTEWNDILRKKGILPPKESLKELEEEEAEKEEQLLQQSVV-------------KTYEDM 52

  Fly    63 SLDELDELED---SEDEAVLEQYRQRRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVV 124
            :|:||:|.||   .|||..:|.|||:|:||.:||..|.:||.|.||||:|||.||||||||:||:
Mouse    53 TLEELEENEDEFSEEDERAIEMYRQQRLAEWKATQLKNKFGEVLEISGKDYVQEVTKAGEGLWVI 117

  Fly   125 LHLYANGVPLCALIHHHMQQLAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGP 189
            ||||..|:|||:||:||:..||.:||..||:::::||||||:|::||||:|:|.||.::.|:|||
Mouse   118 LHLYKQGIPLCSLINHHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTVFVYREGDIKAQFIGP 182

  Fly   190 LELRGDKLTAEELEFMLGQAGAVPTEITEDPRPQIRDKMLADL 232
            |...|..||.:|||:.|.::||:.|.:.|:|:..|:|.:|:.:
Mouse   183 LVFGGMNLTIDELEWKLSESGAIKTALEENPKKPIQDLLLSSV 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
viaf	NP_524032.2	Phd_like_VIAF	8..210	CDD:239286	103/207 (50%)
Pdcl3	NP_081126.2	Phd_like_VIAF	8..203	CDD:239286	103/207 (50%)
		Thioredoxin fold. /evidence=ECO:0000250	92..240		73/134 (54%)