Protein Alignment viaf and Pdcl

DIOPT Version :10

• Sequence 1: NP_524032.2
• Gene: viaf / 39364
• FlyBaseID: FBgn0036237
• Length: 240
• Species: Drosophila melanogaster
• Sequence 2: NP_071583.1
• Gene: Pdcl / 64013
• RGDID: 621135
• Length: 301
• Species: Rattus norvegicus
• Alignment Length: 217
• Identity: 64/217 - (29%)
• Similarity: 106/217 - (48%)
• Gaps: 21/217 - (9%)

  Fly    17 KGIIGP----KAKEAEITEDQIQKLMDDAIQR-----RTDLPLNEGQRDKK------IDDMSLDE 66
            ||:|..    |..|.|..|:|.:: |:..|::     |:.|...|.|:.:|      ...|:|.|
  Rat    60 KGVINDWRRFKQLETEQREEQCRE-MERLIKKLSMSCRSHLDEEEEQQKQKDLQEKISGKMTLKE 123

  Fly    67 LDELEDS-EDEAVLEQYRQRRIAEMRATAEKA-RFGSVREI-SGQDYVNEVTKAGEGIWVVLHLY 128
            ...::.: :||..|:|||::|:.|||....|. :|..|.|| ||:.:::.:.|..:...:::|:|
  Rat   124 CGMMDKNLDDEEFLQQYRKQRMDEMRQQLHKGPQFKQVLEIPSGEGFLDMIDKEQKSTLIMVHIY 188

  Fly   129 ANGVPLCALIHHHMQQLAVRFPQTKF--VRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLE 191
            .:|||....::..|..||..:|..||  |||........|....||.:.||..|.|...::...:
  Rat   189 EDGVPGTEAMNGCMICLAAEYPTVKFCRVRSSVIGASSRFTRNALPALLIYKAGELIGNFVRVTD 253

  Fly   192 LRGDKLTAEELEFMLGQAGAVP 213
            ..|:...|.:||..|.:.|.:|
  Rat   254 QLGEDFFAVDLEAFLQEFGLLP 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
viaf	NP_524032.2	Phd_like_VIAF	8..210	CDD:239286	62/212 (29%)
Pdcl	NP_071583.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	15..60		64/217 (29%)
		Phosducin	35..299	CDD:251094	64/217 (29%)
		Thioredoxin fold. /evidence=ECO:0000250	158..301		35/118 (30%)